Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT51452 chr4 79425–81608 (2183 bp) CR43957, ci activityactivityactivityactivityactivityactivity
active
ubiquitous, posterior, ventral epidermis anlage VDRC

Annotations

stageannotation termintensity
4-6ubiquitous4
4-6posterior4
7-8ventral epidermis anlage4
9-10lateral epidermis anlage subset4
9-10ventral epidermis anlage subset4
9-10head epidermis lateral anlage4
9-10head epidermis ventral anlage4
9-10head epidermis dorsal anlage4
9-10dorsal epidermis anlage subset4
11-12lateral epidermis primordium subset4
11-12ventral epidermis primordium subset4
11-12head epidermis dorsal primordium subset4
11-12head epidermis ventral primordium broad4
11-12head epidermis lateral primordium broad4
13-14brain broad3
13-14foregut1
15-16brain broad2
15-16ventral nerve cord broad1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264617CR43957overlapping BDGP FlyBase
FBgn0004859ci1759bp downstream BDGP FlyBase iFly
FBgn0017545RpS3A6426bp upstream BDGP FlyBase
FBgn0263851snoRNA:CD-246778bp upstream BDGP FlyBase
FBgn0085432pan10527bp upstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

cgccgttgtacctgtatctgcaaaaatttatattttacaaccaccgttgactagtcttggcaatgaatttcctaactataaaacaactctgtacatacatacatatgtagatgtgtatggtgtatccttgtccggcattaaaacaagaaaaataacatttttcctgcaagtgcacagcaggattgaatctggtatcgtcagattcttttgatacccatgcgtttgtatgtatattgtatgcatctatatacatacatacttgtgtgtgtatgtgccaggccttttgtaatttaacgtcttactcaaaactctatgaagaagcggacacatgctgtgcttctacagcttacacatacaaacaaatctgtatgtttgcttaacgtacatttgtgtgattttccagaccctttatgaatgtatgtatatgtgtgtataaatatccgcacaagataatcgtatttgcaggtacgtctgtacgcttctttaagcgtgtatatgcacccatacataaatatacatagatatataggtatgtatgtatgtttggtggtcccattcctttttataaaaaacgttttgtcgattcttggaaactacaaaaccagaaattttgttatacatatgaacataaatacatacatatctctaagtattatcataaaaataaatacatacacatatgctcaattacatacatatgtacgtacattttcgcatccaaacttatatatataaatgtatatatgtaaattgtaaataatttcaaacaactttgcacatcttcataatttgcaaaaaataacggattgtgcgtaggtccgtaatgaaacatatgtattcatatctatttagtattattagtattatttagtgtattgaagcatgtacatatgttttccacaattaaataagtattataagacatgtacatacatatgtggttttaaaaaattctttgagttgtcttcataaatatacatatgtagatatatgtatatatttatctatataatttataacaatttatataatttttaaatgtatatatataatttattaacaaatcaataatcacatcgtctaaataataaattcagtgttaaagcagtaatataaaaatggttcaaaataatttttaatatttaatattttttctactttttgcttgccattacagcactttagttatgcggtgtacccaatgactttattatcctctcttctttggttcagtacaaattttaaaggcttaattagtcaccggttcgaagccgaaaagggtggagaacgttcggcttaagcgatatgctcgcacacttgtgtatacgtatatgtatacacacatttatatcatatatctacgtatactgtatatacattcaagccgttaacgtataatgtcttcttgaatccagtttctttttcgattaagacggagcaagctgcagattgaagcatcatcattagcaagaaactgagctgagaagacctttgaaataatgttgtcagacgaagacaaaaatacatacaaatatgtatgtatgtatacataggaaggaagcagacaaaaaaagaggcaataacaaaacaaagggaatgctttttggacctttataagtacgaatgaacaataaatgtacatacatatgtatgtagatattgtataaattagctatcattatactatgtacatatgttatgaaatataacaattaaaagtatttttacacttgtaacaaatgtttctaatatagacattatttttttccagtatggtacacatgtgtatgtacataaaagccttactgaggttagcctttaaactggatattgcatacattcatatgcacaaatgcatatatgtacatatgtacgtacattgtatgtataattccacaagcgtcaatatacatatgtacatgttatactcgtataagcatttagaaaaaagattcccaagagactaaacacacatgcatatgcgtctgtaaattagggcggacttcagctttatcaaagtcctgcaataacacctctttttaaattaatttgtaataagaagccataacaaccttacatgtgcatacaattcagagcactacctttattacccgtcatttgttattttctgaggaaagtaaagaaattacaattggattactttttcctgtggtcttagacatg

PCR verification status

Line verified as correct.

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