| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT55810 | chrX 2358395–2360580 (2185 bp) | boi, trol |
      active |
amnioserosa AISN, dorsal ectoderm AISN broad, dorsal ectoderm anlage broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | yolk | 3 |
| 4-6 | amnioserosa AISN | 4 |
| 4-6 | dorsal ectoderm AISN broad | 4 |
| 4-6 | ventral ectoderm AISN | 3 |
| 7-8 | yolk | 3 |
| 7-8 | dorsal ectoderm anlage broad | 4 |
| 7-8 | amnioserosa anlage | 4 |
| 9-10 | ubiquitous | 2 |
| 9-10 | yolk | 2 |
| 9-10 | amnioserosa anlage | 3 |
| 9-10 | anterior midgut anlage | 2 |
| 9-10 | posterior midgut anlage | 2 |
| 11-12 | head subset | 3 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | yolk | 3 |
| 11-12 | anterior midgut primordium | 3 |
| 11-12 | malpighian tubule primordium | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 13-14 | head subset | 3 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | midgut broad | 3 |
| 13-14 | yolk | 3 |
| 13-14 | malpighian tubule | 3 |
| 13-14 | clypeolabrum | 2 |
| 15-16 | antenno-maxillary-labial complex | 4 |
| 15-16 | sensory system head | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0040388 | boi | overlapping | BDGP FlyBase |
| FBgn0261451 | trol | 6098bp upstream | BDGP FlyBase iFly |
| FBgn0004050 | z | 13813bp downstream | BDGP FlyBase iFly |
| FBgn0003714 | tko | 20387bp downstream | BDGP FlyBase |
| FBgn0001150 | gt | 35396bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
cttttgggcaaggtcagccctacaattataatggcaaaacatagagtaaagacgagaattagtaagtaacaaggttgtgaccctgcttttgtatacgactatatgaacatcgattatgacccattatcgaactattcagcaagtatccccaattattcattatcctaaagacccaaggtgtaggaaagttgccttcgtaggtatcacatagttggcatatggcgtctcgggagccttaacttatttccacatctggcttatcatgaacgctgatctatgactcgagctggcctgcgaatggagctcagctccgatcttggatctcggatctcggaatggaacgctagcgttcgctgacttggcttcgaactcattttctaattgccccacggtggccgaggaatgtctgtctattcattcgcggtctcctactcttcatcttactgctcactctggtatgtttatttcgtttcgtttcgttttcctgtttccacgcaggtttaattaccacatggagggagctgagagacgtgcaaagttcgaatcggcaatggaatctcggttttcagcatttgcatggatcccccccgagatcgaaaaaagaatcgggggatagcgcttgaaataccgattgtctgctattttaattgagttcacaaatgccctgaaccgaaccccattcacagctggcgatcgaccccttttctccacccaccccctctgaccacccgcccctgaccctgaggatctgaggatagaagtgctttgatggctagttagttcgttggaaatcaaagcagttcgattactcaatattttcacagtgctggtgggaaattaatacatcatcgtggccccaggcctcccatccgaagaccccaaacccactcgaccccctccatttgcttccccctccccctctgcggagggctctaattaaaaactgcttgaagcaggtgtgcacaggaaaaaaggggaaagcgttgctctaatccatcaaacagttttggcttcatacaggttcattgatcaaccgagagagttccgtgttagcgagccaatcgcaagatgttgtaatattatatatgtatgtatataatatctattcagcggactagcgacgttttaagcacgcatttactcgatcatttcagtttggtcgaaaaagtgtcttaaaatttcactcgaaattgtttcaattcattcacaattttccctaatccgatattcctagatttcctttgtcagtccccttgcgatctgaagtgaaccgtttaaaatcggctttataggccagacgactcattccagccgatctccggcgaagatatcaacatccgcacatccctcggacgtttttctcgtagcacacttgccggagttcctgaatcactgaatcactcactgggcacgacgaaggcagggaaagaagtgaggtggctacctgggcattgttactgcgattctctacctgtgtcaatgtcagacttcagcgctaaattgtcgcttattaaatgtctctcgtcccgccgacgagccactttatcaaaactcctgagggcggagatacatgagatacataagataaaggaggaaatggcgggcggaggtagccgaattccacgtaaccgtagtgtcgtctgcggcccattgtcgaaaattatgacttgttttgggattggagtgcaaatagcccacttcctgtctgtctcagtccgcctcagtctgcgctctttgctgtctgctgtcccggtctttcttcccagtccatctaccccctgcctactgcgtcgctccaacgtggccgttgtcattgtcacggaccgccgatgtctccactgataagactggtgctcatgtggtgggatggggagttgggtaggaacatttgtttatgcactaccgtctttgtctctgtccaaactactgcggttagttctggattgctggtgatactggtcgtcacaagctcattggatgcagtcacatcgtcaataggaatagcctagttctacaccgtcgtattttaacttgtactaggacctttcgtaactgaccaggtagaatacacattccaataaaccgcataaacagagcaattgatgtggtcaatccccgccgatgtatttagtgcgataagctgaagatctacgtgcctgagacgcacctcacctccagtaaaggcc
PCR verification status
Line verified as correct.