| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT56148 | chrX 3032372–3034558 (2186 bp) | N, kirre |
      active |
middle, anterior endoderm AISN, gap | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | middle | 4 |
| 4-6 | anterior endoderm AISN | 4 |
| 4-6 | gap | 4 |
| 4-6 | head mesoderm AISN | 3 |
| 7-8 | ubiquitous | 2 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | ventral ectoderm anlage | 3 |
| 9-10 | head subset | 3 |
| 9-10 | ventral epidermis anlage subset | 3 |
| 11-12 | ventral epidermis primordium broad | 3 |
| 11-12 | clypeo-labral primordium | 3 |
| 11-12 | head epidermis ventral primordium broad | 3 |
| 11-12 | lateral epidermis primordium broad | 3 |
| 11-12 | foregut primordium | 3 |
| 11-12 | head epidermis lateral primordium broad | 3 |
| 13-14 | head epidermis broad | 3 |
| 13-14 | trunk epidermis broad | 3 |
| 13-14 | foregut | 3 |
| 13-14 | clypeolabrum | 3 |
| 15-16 | antenno-maxillary-labial complex | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004647 | N | overlapping | BDGP FlyBase iFly |
| FBgn0028369 | kirre | 3808bp downstream | BDGP FlyBase iFly |
| FBgn0028746 | CG18508 | 34115bp upstream | BDGP FlyBase |
| FBgn0000644 | Fcp3C | 35037bp upstream | BDGP FlyBase |
| FBgn0040396 | CG3939 | 36679bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tatgtagctctggcgcatgaagtcggcatgtatggcgatgcataaccaacatgcccatggttatggatcgtaaagtgtgcactttatggtcggaatggatcatccacataaagttgcaaccaaatttaatggaaataaaaatttaagaggggaaaatggagggagggcacttaaattgaaggatcaactagagatgagggtagcaatacctagatttatgttcttaaaaaggaagagtacatgaagtcaaaactaggcaacattaagtaaataccataaataccatacactatacatttgaataaataatgcattaaatgatcattaaaagatgtgagaagcaattggtaagaatgcttcagttagtgagtaaaaccaaggtagtcattaataaccaactcaaattgaattcgaatctcaatacctcaattccatcaatataaataactttgtactgtatgtctgagatgcatttataacacctaaagcaaaaaaccaggccaattcccacgaatgcaaacccatttccaaggacgcggcacttaaaaacgcagattattgtgaaagtctctcatatttgggcgtctcaattaatttgagacaaccacttatcgaccatttactgtcgcatttattaattaatcgacgccgccgacgatggccaacagggacaaaaaaaaaaaaccaggagtatcacttgaaaatataactttcccatcagtaacttaagaagacttaattaaaaaacggtactcgtatatgaaatcggctaatttctcaagtgttaaatctgctgttactccttgcctttcgcttggccaaaataaaaaaaaaaacaaaacctgtaagtgataaagtaaacttcaaaaaaaaaaataaaaaagaaaacaaagtaaagcagaagatgtcgaggaatcttgttgcctggtcacttgatatggcattggtggatatgcggcagagcagttccgttccgtttcgttccagacgataccgatgctcgatgctcgatcctgtttttcgggacacacctttggaaaccagaattggcaaggctcttcaggtagaatttcatttggcaatgtgcaatgtcttcttctcggtaatctttgctctccggaaatccacaatgtttttgcgctctgtcttggctgatatttgttatttgttcccatagtcattgcataaacatgaaaatcattttcccagcccatctctctctctctctctctctttctctctagtttatatatgttgacaactactttccaagttttgtcttgggaaaatgcctcaaatggccaacgaatgaattgaggttttcttctctacagatatgtatgtactgttttgctggccaaactaattatgaaaacagtcctcacatgtgtcggctgcaattaaatccgtttagaaaaatccatggattgtatggattctaaatctcagctcgtcttggcttggctcgaactgacttaacttgacttggctctctacactacactctacactgctcttctcttctcggcttttattgacttttaatgatggccaggcgaattagtgcgccctgacttactctttctgccatggccagtttaatgagttttctttatggccaacacatgtacattttcgagtcggtagatacaggtactcacacacagatagtattcgagtcaagatacaagatacacacaaacagagacgacgaacgcactgaccgaacaagtttttagtttttttttttttttccttctgttttcttgggttttcttggctggtctctttggtcttctctcctttgtgtggcttgttcttgaagtatctgagtggtacaacaaaacaaaaaaaaaggctgacaacctcagaagaacccctcctttcgacccagccccgccccttcgcccccgcccctgcccccttctaagaaacacacaccaacagcaatttttatagatattacccaaagtgtcttgtttggtttggttttggctttgggttttggctttggtttctcttcttcgtttttggcccggtctctttttgtcttccaggcttttgggcttttaggctgcgcccctgccacgccccctagaaatccccctatgttgcccatgcgatttactccgatactcttatacagacagatctctcatatggtcggtctttgaaaagtggaaaagc
PCR verification status
Line verified as correct.