| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT57345 | chrX 5468646–5470778 (2132 bp) | Vsx2, Vsx1 |
      active |
brain primordium broad, brain broad, ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium broad | 3 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | brain broad | 3 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0263512 | Vsx2 | 14431bp downstream | BDGP FlyBase |
| FBgn0263511 | Vsx1 | 19642bp upstream | BDGP FlyBase |
| FBgn0085464 | CG34435 | 38712bp upstream | BDGP FlyBase |
| FBgn0250904 | CG34434 | 39941bp upstream | BDGP FlyBase |
| FBgn0029778 | RhoGAP5A | 41959bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctgacccaaccacgcccacttccgccccaaaactccatccaaaagaaaaaaaaaacacacaatttctttgcatatgaaaggaaaagaaattgcttaacggcaattttcacccttcgatgcacaaatggaaatttcttatttcgtaaatgaattaatgccgggattacgttgggaaatgtctttgatggcgattttttttccttggtctctctacgcttttgctatgcaaatgagaagcatcgctacgcatattttcaatattttcgctgatggagcagggcacctggaagtgctctctacctggtgtataaataaaaataaaattaagcaatttactattccacgaatcgaggcagaaattatgcggaaatgtatcgaatgcaacatctgtcgtgtgagcaaataaattaagggggcataaagaagcgtatctgatagatagcgcgcacaatgggcacaattttatcatcatcgctgacatcgcgctgacaaaaggatgtagtgcaaacatttcacgtcaccgtcggcaggacgaaggacgaagggcaaacatgtcaaccaattgtgacaagtcgcctctgaagtgggaaaacgcggggaaaattccaaattcgggggtagcgttgctatttgcggtctgtcttcggttcatcgtcattattattatacaaattctaggggcatctgcttagtttttttaaaaaccaaacccgatgccaatcttcagctgttagtaactacatctatagaaagatgatttaaacctcgtatagcataatagttaatatcatatactatttccttctttttgaattgtgattttagcgagtttccattgccttgaactactgtactcccaaaaaaaatcgcagtccaagtaagccgagtgcaatgccaacagttcaagtgtcaacatgccaaatggaaatagtaatagaaatatatatatacatctattcgtttagttgcaatttcccaacgactgtcagcggcagtcgaaggagttggctgttaaatccgattgcaattcccaatccgagccagaatcggaatgggaatcgaattcgcttttgttatgatgattgcacaataaatatgacgccggcacctgcgacttgattcgatttaataacttgtgtcaaacgcacacacacaaacagcagtgtgtgtagctacggttcacttaaatcgtttcccgttaactgcttttgacacgtcgccacccgccaactgccatccgcttttggccaacttatcgcaacctttggagttgccaatatttggcatgcaacaaggccattgttgcacgataatggaaaatgccaaatgtgatttagcaagctcaggaaaatacctgttgcctattaaagttatgtcaacgaaacacattctaaacatctttaaagcattctaaacgaattgcggttgtaagataaatgacgtatcgctaagtacttatgtacatcaaggtaattggtgcggagtaatccattaaatgtggccaacagaaatggcgaaatcacaaattcgatatcattcaattttgcggaaaatgaggatgagaatgaaagtcgaggacaacagccaacataattccccattgcagttgtgcgccataatgacatcctgtgcgcaatgcatcgcgctcagcccacaaaaagagtcctggcaggcagccattagcgaaatatgagaaaacacagaaccattgcaaatataataagagcacccagagcgaatcgcatcgagtcaaaggagaagaattgcaaaaaaaaaaaaggaaatacttagctcagggtgggttgtccgattgcatgggggttaagttactgcgcacaccgaacaccgaattaagctgaataatttacacaaccccttgaaagtgcacttaagagctacaatattataataataataataataataaatggaagcgtaaaaatgctgaaatattatttcacactcgcacccattccatcattcgtttcgtcctttggcatcctggcttcctgtcactgactgccaatagaaaattgcgttccccaattgactgactgattgacaaatcgactgactgactgactgtctgactgagggaattgcgtttcggctgcacggcaaaaataagtgcat
PCR verification status
Line verified as correct.