Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT5802 chr2L 11334422–11336523 (2101 bp) CR44584, CR44585 activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, brain anlage subset, brain primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10brain anlage subset2
9-10ventral nerve cord anlage subset3
11-12brain primordium subset2
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset2
13-14brain subset2
13-14midgut subset1
15-16ventral nerve cord subset1
15-16brain subset1

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265795CR445841687bp downstream BDGP FlyBase
FBgn0265796CR445854129bp upstream BDGP FlyBase
FBgn0032360CG149267914bp upstream BDGP FlyBase
FBgn0265794CR4458315164bp downstream BDGP FlyBase
FBgn0265797CR4458619579bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gcaattcagtgcagatgggatggttgtgttctgcttcgccggaaagatcacgtacattcggtattatgggaaataaatgtgctcaaggatacattcggtgagggttggatgagggggggggtatattattgcgaaaagtttaaaaattgattttcatctggcgaaatgccgcagcataaaaggatttccccctgctcatattggaattgatttggttctacgtaaacataaataaaatatgaacagccattgagtcctggctgagtaaatatttttcgagcagagcgtctcctttgagcatttcgctgtgtgcatcaaggtgtccttttttggcccccccatccggctcatcagcagtccggtggtgagctggtaaaataaagcctttagtaagtatttcataagtcgccggagtggatggttcaggatggaaggatggcaccagttaccccggccagataagtaagcaataagccccgagctgatggacagcgcaattttctgggcagcctgggcgctcttcattggcacacgtccgcctaatacaaacaaggacatgagctcgctcgattcgtgactgaaaagtttcctggcccggcagcatggaactctatcgtacttttcgtattttatttccatcatttttactcgaattgcgagcttcgcctttcgtatttttatttttctttttttttttcagtctacgctcggtcgagcaaatgtccgaaactttggcgctcgcctcggcgaatgtttcagataaaaatttgttatttatggcttaaggtttcaaactgaagagttctgctcaatttgcgcccccgaaaacgagtgatagaaccacgggaaacgttgaagtggaatgaaaatgcaataaaagtttttaagccaagtaactttttatgaaaagtatggcagtctaaatcggacatgtgatgtaagaaaaaatattttgctggtaatatactaaaatctgtaaaagtcttttagtctttaagtcgctcagcttaataattaagtgttctatttaacgatgttttgcgaaatctttttgtctggcataatcaaatgtcctttgagatgtcaaaatggttttggttaactcctctgactctgaatgcagccacaaataagcctgaaacttgactccaatttcgctgagagactgctgcgaaagccaatcaaattctaagctcaaattaaaacgtcgagcgattaattgcgcacaattaaaaccaacgcctagtcagagtcacaatgcgatttctggtctcattaaacagagttcaacaacttttgcccgtgagcgaaggaatcataaaaatcaaaagctcgctggcttcgaggagcaggggagttgtaagtgagcccaggccaaaatcaaaccatcaaagtgccggtaatagtttcgggttgtaaaactcacacgaacaataagttaatcaatctcaaattttaattacaaagtaacaacttcctttagcaatttcaggcgcgatgaacccagtacccatctcattctcataccataaggccctctctgtctctgtgcattaatgggcattcggatgtctgagccggcggcgcaatttacataaaaaacgcagccgcaaggtgtgggccgacgtatccacaagatactcgcattcacagatgcagatacatacgcgcactgaaactggcaaacatattttatgtaatttgtctttgtttcgtgtaataaaatgaaaataaaattgtgaattgccgcccgctgaactggactggaaaggggtaatgttagtgggaatgggaaaagggttggtgccgaagatggttaccaccagcacccgggaagaggaagccagcgaagcaaactgaacgtgaacgggaaagttaatgccttaatgccccaagtcggagttgcagttaatgctcgctcaccaccattgatcatgaaaaatggaactcgccggcgaacgagttggaaatttatttgaattttatgcgacgtcctaggccccaggcacacctccatatctatatctcatatcttcataagcagatgcgccgccaggatcaggagcaccactcacgcctgtgtaatcctttgtcctgcgagc

PCR verification status

Line verified as correct.

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