| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT58858 | chrX 8517240–8519439 (2199 bp) | oc, Caf1-180 |
      active |
brain broad, ventral nerve cord broad, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | brain primordium broad | 2 |
| 11-12 | ventral nerve cord primordium broad | 2 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 3 |
| 15-16 | brain broad | 3 |
| 15-16 | ventral nerve cord broad | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004102 | oc | 6952bp upstream | BDGP FlyBase iFly |
| FBgn0030054 | Caf1-180 | 16904bp downstream | BDGP FlyBase |
| FBgn0025864 | Crag | 21172bp downstream | BDGP FlyBase iFly |
| FBgn0040929 | CG12659 | 31479bp downstream | BDGP FlyBase |
| FBgn0030053 | CG12081 | 32434bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gaaggtgaacaattggttcttcaagatggttttcagaaaaattaaacaaccttctattaaatacaaataaaactgcatttatatattattaaatattacatttatttgccaacttaatctcaacaaattataaacacctttgtttaatcttcttcttctaagcggattttctatcattttccacacactttaaagcgatcttaattgaaactcctctaggcgaaacaaattggtagccaataaagttggccaatttttggtgaaaatccaaatccctcaagcccatcaatttttactctaattgccttagtccctcaattaatccaaaacaaacagagacaaacaggagcaaacatcacaaaaaggaagaagtcaactgaaaaattgttgcaaaacgtatcgggtgaggaaatcgcagggagaaggcctagtcagcagtgatatgtaactatatatatagatgtacatatgtacatgcatctacatcggtgcaagacctgatgagcaccccctatatggtgccccctgtttcactccccctatttcactaccctttacgtatccttgcactatccatagattttcttgggtgcactgcgaaaaaatgaaacacttatctaacactttattggctaaaattaacactttatattttacgtactacatcttgcagctctataacatggtatcataatgtaactttattcctatattatatatatgtatataatattcttacattgaatattgaattaacaactattgcttattagcaccgatctagagtagaggcccaattatttttcttcgtgcaattgcctgtatatatcctcctgttttctttttcgacattcctcccgcctttgtactttcacccattctcctattttctggtctctttctagcttccctccgatttttcaccccctatcatgcgtattccattgccatcgtactccttcccgcgtttcattccatcgaggtggaatttttgcctgcttgattttgatttcaacgttagttagttagttagttcgttatctctggtgccgttataccaacccctacgaccaaatggcccaccccctaaaccctcctggattttccccgagttttatgtacgatatttgggctaccaccagcaggatggggagggggcttatgtaccgaaaaaagggggtttttgggggttggttaaatcggggaatgggggttggcttgattggcgttgcctgtttggccaaatgaaaagaaacatttttgccagcaaatgaagaagggaaaaatgtagcgaaagaaaagaaaaatgcctggaaaagaggaaaaacagcacggtagaaaatcagacccccccccaatttcacaaagagcaagaaaaaaaccgcatacaatcccagaaaaacaacaagattggtaaagagggtaaagaagaggaatcgcaatacgggaaggggtggtgtggaggaggaagaggtgaaagaagacagcaaaagaggtggaaaagaggacgaattttgtgactttgaagtgcgagaggcgaaaaatgttgttgaaggtggcttttcggatccacaaaaaaaaaaaacggaaaaagaacggaaagagcagagaaagagccaagagttatggaagaaacggaagaagaggtggaaacgaaacattaatgtaagcaacgcaaaggcaaacaaatacatgcaacaaaaagagagacacacacaagcacatattaatgtgcgactcctgttttcgtctcgctcgcactgcaatggcgacaatttaacggtaagcaacgcgctgcgtcgcgacattgtgaacgccctccgcggcagaacgagatgggcatacgcgttgttgctgcgagtgggagcgagagagcctgactggcgcaattggaacgcaagtggagcgcgtgtaagcgtgtggaacgcattccacatggcactgggaacagtaggaacagaaccggtgctgggaacggtccgagaagagttcgttcactatgcttcaaatgggcctatgttttaagtttgctatttgatttataagagttctgtttcagcttaaaatatgaaaagcaatatgtaaaatatttaagtaaacgcattctaagtttcatattataagaagatgccaaagagcaaagttcttaataaattcaattgaaaactaggtcactgagtttcctaggcatgaatgttca
PCR verification status
Line verified as correct.