| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT58863 | chrX 8529599–8531672 (2073 bp) | oc, Caf1-180 |
      active |
brain primordium subset, ventral nerve cord primordium subset, brain broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 1 |
| 7-8 | not active | 0 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 3 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | brain broad | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004102 | oc | overlapping | BDGP FlyBase iFly |
| FBgn0030054 | Caf1-180 | 29263bp downstream | BDGP FlyBase |
| FBgn0025864 | Crag | 33531bp downstream | BDGP FlyBase iFly |
| FBgn0030055 | CG12772 | 41497bp upstream | BDGP FlyBase |
| FBgn0040929 | CG12659 | 43838bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
atcccaaacccagcccaacccataccattccacatttacagccagccatggaggacagcccgcaaacaccccccgcataatttattcattgctcgccgggcaaactaattgatgtgggaaaattgcagccgccggccatcaggcacacgcccactttcacgcctcccccctgacaaataaacaaacaaacgcaaacattcagtaacagcaaactttactgagacacttgactaaggcaaacaacacttgaggcaaaaattgttgaggctgtgagaattctggatatctggttccttgagaagatctcccaaaataatattccatatatggaatttcccgagtaaacataaagttggaaaatactatagccgacattctaaagatgattgctgagctaaatattataaccgacattctaaagttgattgctgaactaaatattatagccgacattctaaagataattgctgagcttaagtatgcaagttacccattttattttttatgcttactaatgaacagttcttttgctagcaagtgtgtaatagtctctatttttattaactcgattcccggactgacttttagctaagcacacatataatgttccgcattgcattaacaaattgaaaattatgcataactctcgcagcgtctctttctaagctccatatatgatgcatcggtcgctctctttcgcgcaaatgggcatgagtggaaggagtggaaattgttaatccgcaatgggaaaattaattttataaaacagctgtgcggcaaaagtttcccttctacgcttctcccctcatttcgcgcagcagacaaatccttttgcaacaaaggaaaagggaaaatggaaaacgtatagaaaaaaaaaaaaaagagttggctaagtttaggtgcgctctcgccctctccctcgcacccattgttgccgtctctttcgcgctcgtattccaacccccgacgacgaacagctgaaaacgaggcgaacatatctggaatccgtggtgataaaggggcagaaggggggggagggagcccacgagaaggggtaggctacaccatggaaaaaattccattataaatataggatctatcagagatatagtatgatctctcagagatatagtatgattgcaatctaactgtatgctttatgaaatactcatgtcttaaagatccttcacattttcaatgacttcattaggatagtgtttgttcatctattgaaaacctatacaagttattactaaacagggatccccctttgaagaacttctgttttcgaacatttccatttaaaatcggaagattttcttttagtgcacaggagctgcagaggggttattattattaggggtgcctgcttgcctggctgggattgggattgggattgggatgtttctgccgctgctggcttcccagtttaccagtttgccagtttccccgtgatttatgactgctagcgatggcagccatccaaactccgaccaccgacccacaggcaccaaaaatggaacaaaaaaaagatgagaagagaagagaagtgaaaaacccgatccgcaccctcgaacggcgaatgaaaacatttgggcgtaaatgtttgctctgttctggtgcagataagctgcgtaaaattattacgttatttgtattggttgcaatcaacgccctctcacttggaaacgagacacagggggacggggtaaacccacccccggatgccaaataccggattccggattctgaactctgaatctcgctactgggccataaagatgcctatcattcaattaatatttaccagaccctaagccccgtccttctgattatgactccgctttcgttgcggggatgctgattctgattctgattcggattccgattcggattcagattctgttactgattctcacctcggcggtaatgattatttatgtgaaatgatattctgttccactgacaacgtggtgacctttcaatggaggcctcctgttgcgaggactcaatgttaatgtcgtaacgataatatgatggtcttaaaggtggtctgtctatggttgcactctca
PCR verification status
Line was not verified.