| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT58864 | chrX 8531143–8533327 (2184 bp) | oc, Caf1-180 |
      active |
mesectoderm anlage, ventral midline, ventral epidermis anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | ventral epidermis anlage subset | 2 |
| 9-10 | mesectoderm anlage | 3 |
| 11-12 | ventral midline | 3 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 1 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004102 | oc | overlapping | BDGP FlyBase iFly |
| FBgn0030054 | Caf1-180 | 30807bp downstream | BDGP FlyBase |
| FBgn0025864 | Crag | 35075bp downstream | BDGP FlyBase iFly |
| FBgn0030055 | CG12772 | 39953bp upstream | BDGP FlyBase |
| FBgn0030056 | CG11284 | 44441bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gagaagtgaaaaacccgatccgcaccctcgaacggcgaatgaaaacatttgggcgtaaatgtttgctctgttctggtgcagataagctgcgtaaaattattacgttatttgtattggttgcaatcaacgccctctcacttggaaacgagacacagggggacggggtaaacccacccccggatgccaaataccggattccggattctgaactctgaatctcgctactgggccataaagatgcctatcattcaattaatatttaccagaccctaagccccgtccttctgattatgactccgctttcgttgcggggatgctgattctgattctgattcggattccgattcggattcagattctgttactgattctcacctcggcggtaatgattatttatgtgaaatgatattctgttccactgacaacgtggtgacctttcaatggaggcctcctgttgcgaggactcaatgttaatgtcgtaacgataatatgatggtcttaaaggtggtctgtctatggttgcactctcaatatgggtagcatcatagttctagttaatacgagttctcaattattattatctcaggcaatatgtatttgttataatccactttaaattctagtcaaactaaccagctactaactctttacccctgccgtcggcagtctagtttttttgctcgggctaattgagttgcttggcttccttggcagtgccaaacacgaagccccattctcaagaacccagaccagaccagaccaggccaggccagaccatcggatccccaatgctgaatacccagtagttacccaaaccgaaagccaagccaaaacgaaaaccaaaagccagacgccttgtaacatgcaagcgaatcgtgttttttgccccaactgctgctactctttccccgcctttttggccagcatttccatttccattcgcagttttcagtcggttggggttttttaaggtttttcctagttttcctgcctgtaatctgatacgtgaccgagtgtgggtgcctatgtgtttttataacagtggatggatgcattgacatgttgcgttactacccagaggtacagtggcacgaaatggggttaagatttgaatgtaatcggtactatatcatatgatatttgcaagaaatttgcacacgatttagtaaatatcattgaaatattccgatgatgcaaccactgtactcgcatttgaaaatcaatcaagccgtggcgacaagaacaacgcaagaaactaaccaagaagaagcgacatgtgtggaaaaatgtgaaaatctatacaaatgtcaattcccagctacacccccgacattcatatatagtacatccatccacacttccttatacacatacatatgtatatcgccccttggtttcgccggtgtgcattactcgaatcaattgtgtaaaaaacgtaactttgaaaaggaaacaatacagtagcaggcgattcatgggacatgtgcaaggtgtccttgctgtattctttccatgctcaccattcattcggtctgcattccccctccccaccccttcgaaaatagaacgtgtcgtttttcattcggagccgaccactgcaggggcttcctccttaatcgctgttgctttttacggccaggtctttaaagttgacttgctattaactgcctttctttctttctttcttttaaagcgtgctcgttatctaagtagctaacttggtatccttactctcatatcttttatctcttgtttttatctttatctttagagcgctctactaacttatcaacttatactaaagttagacgtcttgttacagaagtttctgtttatatctttcataagcctgatgaaagttgcatgattctaaccctgcagtgtcacgtcctcaaattacacggacaaaagcagcggctaacaaagcaagggcaagcaaagcaaagcaaagcaaaagcaaagcaagagcaaaagcagaagcagaagaaaagcaaacaaatcgatagatcaatgtgtagctctgttgccaataatgtttattttttgtacactcgcctggcgttgtgtgttttcattgcagtttcagtgtccaaaaacgatcgatgttgcggctgtgtttgcccaagaaattaccaaaggagatgacagtttttttttttttttttccaacgaccggaaactgtga
PCR verification status
Line verified as correct.