Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT58934 chrX 8659357–8661571 (2214 bp) Lim1, CR43297 activityactivityactivityactivityactivityactivity
active
ventral epidermis subset, amnioserosa, clypeolabrum VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral epidermis anlage subset3
11-12ventral epidermis primordium subset3
11-12clypeo-labral primordium3
13-14ventral epidermis subset4
13-14amnioserosa4
13-14posterior spiracle3
13-14clypeolabrum3
15-16lateral epidermis subset2
15-16amnioserosa3
15-16posterior spiracle3
15-16clypeolabrum4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0026411Lim1overlapping BDGP FlyBase iFly
FBgn0262989CR4329739424bp downstream BDGP FlyBase
FBgn0030063CG178943822bp downstream BDGP FlyBase
FBgn0027330l(1)G002045048bp downstream BDGP FlyBase
FBgn0030061CG178548260bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ccaagaatggtgggtatggcgaatgaagtcggggcatactgtttgtattggcgcccaacgtggggcccaacttctgtcccgtggcgcggccattgccccgccccaccccgccacagccctccaccatctgtgtgtcggcaaaagttcttaagaagtttttgtgtcatgccctcaggttgctgccgctgctgttgttgtaaaatttattataaaactcacagcgggcggccgctcaagagaaagatgctccccggccccctaaagttgtacaaattttctcgttgacatctctggcggggtaaaggaggagattcccccaatcccaaacgaatccacatccaaaacccattcgtatagccatactcatgcccatacccatcccgctgctcttgatgagctgacgaactcccgaagtcaacgctttgatggggatcgagttactcaaagctatttccccagaaaatcagctggaagctgcctatatctatgttgatatatctgtatgccgccacagacatttgatacgcttgatattggtgaaatgaaacaaaaaaaaaaagagtgcagccttaatgaagatgcaaatgtatcttcaactgccgctgacagcccacagatgtccccctcccagaccctctccaccacctccggcgatactcccgattctctcgagcagattaagatttgtttggtgtgcctcctcttcaacttgttggcatttgtcactttcgtttagttgtgaagagggaccccaaagaggtgttgattgtgtcacacttgtcgcctcaagagaaagagcgcatggaatccggaggagcgacaagaaacgaacgccgcctaaatatcctttaactgtaaccaatgacacatcaaaggccagcgaccgaaatcccgagtttagagcccagtgctcacgatcccgaaccaaccaaacccattcgaaccgaaccgcaccgaatcgaacccgtgctcatctttaagtctccgttaagtgctcatgggatcggaatttgggtatttcgagtgcctccgatcgcgtggagttcaagaaaacaatgggaaacccactgagggagggtacggaaaatttgtagctctagtaacctgatgaaaatgcgagcaaggtgccgcagcgaggcgaaagaaaagtcggcataatgatgttgttgcggtcagatcgtagacaacatatgctgcggatatccttgacaggtcaaacgaacagctgcttaacgatgggaaaaggattcgaaaggtgatggcaaccttaaaacgagagaaccaaaaaaaaaaaaaaaaaaaactgggaggaacttcaacttagagatctgtcagcaaggaatttgaattggaaaggtgatggtatagttaagtagtcatttaacttttattgaaaccgtttgccacaattgaagtgctataaaacacattgatttatgagtacactttcaacagcactaaatgtttactacgaactatgtaattggagtttccctagttcacaatcatatgaaatcctattacttacgatcggtggacttcaaacattaagtgcatcgactaagctgcaattaagtttctgctttggcaacacttcctcaattaaaccaaggtcttttagatataatgcttatccactttctgcttgcctagctaatgtgctcaatttgtaagcaatttttctaatcccattatgtaggcttctagccctgattttcctgtaatcgcaatattgcatgttagttaacatttttaagcctttctcagagcttctcatttctacaaaggagggtcgttctggaatttttgcacattaaacttgttcgtttttggcaaattgctcttcgctggctattttctttttttcaagcgcattgaacttccgtttttaatgcgctgccacgcccacatgcgactgcgtccgccctcgttccgacattaattttagttttattgtatttggtttgttgttggttttactggccaggcaatgaagcgttgcaaggcggcaacggcaacgttgaaaaatcgcgtccgactattttttatgattttttttttctttctctctttttgttttattattattttttctttgacttcgcggagcggtggggagggctgcggcgatgaccgcgtttgctttagtttaaacatttgccagtcaaagcgagcttaatttatgccttttttatgctgatgaaacgcagacggg

PCR verification status

Line verified as correct.

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