Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT59129 chrX 9013396–9015630 (2234 bp) AP-1gamma, fend activityactivityactivityactivityactivityactivity
active
yolk, brain broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14brain broad3
13-14ventral nerve cord broad3
13-14yolk4
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0030089AP-1gamma1620bp downstream BDGP FlyBase
FBgn0030090fend2610bp upstream BDGP FlyBase
FBgn0030088CG703911010bp downstream BDGP FlyBase
FBgn0004856Bx4212760bp downstream BDGP FlyBase
FBgn0030087CG776615625bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cctcgcaggaagtactccaaggatttgtaagtggtatgttttatagatagttatttttattgttttcttgatactcctccaatgtttcgaaacattaagtgttttaagctggcaataggtaatagattttatgtattgttaaccatttcatagtacggtttttaccagttagatgcaataacgagttagataagtacttgttattttgcaaaagagggaacactttatcggctagttacatttcccacagcgaaaaagaataacttccaagttccattgttagtacggattagcaaagtagaactgtacacccactggatgccctcaaaaaaaaaggggcaatttgtggggccagtgaagtagctccagtgccgcctgtctctgcaatgattgagattagtttccatttcttaattgaaaagttgctctaatcttttgatatttgtggaaatttgccacagaaatttatcaattttccggcacagccttggccgccttggcgcccacttcgaaccccccttgattccccaccctcccccgggtaactacaattgcccttctactcggcgaactgccttgaacagcaatcgcccttcggctctcgctgcactgaaaaaaaaaaacaattggggccaaaagggcggcgaatctgatgccaattaagagaaaaggtaaattaccagcggaaggcaaagttttgaatttcctttcatgacaagttttgccagcaatgataatataatgagcacatttcgcgcacactttaactcactgtcaaagtttccctaccaattactccattgattggtaaaataatttgcaattacccggaataaattgacggtatcagttacaaaacgaaatgaaaataaataagccttaacattatcttttaatcgtagataaattaaagctcaagtgcaaataattgttcacttggtttcaaatactcacaacctttatagatattttcaaaagatttctaaatcaaaaccccgcattttcctcacagtgtcgatgctgttgtagttgctttattcccttggcccaccaccccgaccccggaaaaatcatccccgcccctccgccctttgcccgctggcactttttggaggaaaggaaaaaagtaattttgtgcaacgatgcgacgacccttggccaaaataaaaaaaaaaaagaaaacgaaaagacacaaaacagaaaaggaaaaacaacagcgggaacaacaacaaaattgtaatgagaaaccttttatggcacaaacacatgctcgcttttccacccaccccctcctacttttcccgccgttcgccccttcgccaccctaccacccagccacccaaaaagccaagttatctcttctgttctcttctcgtttgccttttagtcgtagtctaattttatttggtttgctttgcgcttcatctgctcctccttctcctttatctttgtccacttctatcttttgtctacttagaattaataatttttgttgtttatacttcttttttttcatctccatcgtgttgtaatacaatatgtttgtaggtcctctatatgtgtacagctacggtcaagataatagcagcaggtccttgattaaaatcggattaagaaaaggggagagtccttttatcagtttatggtggaaaatgtaatttaaatttgtcatcgatatctaagtttagcgtttattaagctgacgattttttaggaaaacacaaagaaatcccactgctactattttgacatcagctgtaattgcttttgttttcatagcgtttttttttttttggttgccttcttgcttactcttgtttgtttgataatttatattacaaaataaaaatcaaaaagcccaacaaggttggggccagagtgggggttaagggtggtggtggctaagggttaagcggaaagagagaggtgaattttggcaaatgatttggatttggcaggtgggccccactccttgtgctcttcttctgctttcttgctctctctcccgctaaatttcatttcttttgtatttgtttgtttgggtgtgcctgtgtgtgtatggagaggcgggggcgtgagtgtgggcgtgtccattgggagcattggagcatctttatcgaaataacattgtaattgctttttgataaatgaagcacgcgctgcacaactgacagccgaacaacaaaagcaacaactaaaacaaacagcgcaagcgagcgaaagtgcaatgctctc

PCR verification status

Line verified as correct.

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