| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT59438 | chrX 9630797–9632904 (2107 bp) | Sp1, CR43498 |
      active |
anterior endoderm AISN, procephalic ectoderm anlage, anterior endoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | brain primordium subset | 2 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0020378 | Sp1 | overlapping | BDGP FlyBase |
| FBgn0263509 | CR43498 | 8277bp downstream | BDGP FlyBase |
| FBgn0000233 | btd | 39207bp downstream | BDGP FlyBase iFly |
| FBgn0030151 | CG1354 | 41978bp upstream | BDGP FlyBase |
| FBgn0264786 | CR44016 | 44348bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggacctttttgacttattcaccttacacatccagctgagtatcacttagtctaattcccctacgactatgcattctgcataacaaagatttttgctaatttctcaacaaaaacgggggaaaaaaaggcaggagaaaagaacgaggacaatgaaaggagaccaaagcggagataattccgacacacacggaattatggtgaaagaaaggcgcagagcgctcagatttgtcaggagattttcggctcaggggcaacttaacaaggcacaacaatgtgtggccaacgacgacgatgatgatggtgatgatgatgacgatgatgtatgccacatatatcctatatatgtacgagtatctggtatgcagtttgttttcgttacggctatttagtgctttggcctgctcaagcgcctcggtttttggtttatttgcttaggcggcttaggactgaaatgccatagaggatttatcctacccattcctcataacgaaaaataaaagaagacaaaaatcctctgtgtttgctgtgcatttcacaactttttatgtggtcatatttcttgcaagtgctgaagtgtgcctgactgacatcccaagttcggatgtttgggatattttcttgtcttgtcttgtttttttttggttgggatatgttggggggcccttcgaatgacaggaaacgagcgccgagccgtaaaacgcttcaactccttggcatgtttaattgccgttagtttttacactcgccaagcgaatatgtcatcgaatgtcaaaggcagcccactaaaactcagctcatttttccgctttcgcctgatttatgttgtaggtggtgatttacgaggagggtaagtgtttgggttagcaactcagactcagactttcaattgaattcaaccagatcctttaggatttattctcgcttgtccgtaactgtccgttatgcagagtttgtgtccttaagtcaattatcagctgacattacgataatatttcaacacctaaataacttcatttaatccctgaagaatgctgttaaattgggtatatcatatgaaagtcaaaagtgtttgcgccccctgatctttcctttgatagctcccactctttggtgtctttctgtcagcacttcccaaatggaaaatctcagccgcacagaggcccagctgtaaatattgtgttaaacattaaatgaagtcgttaaaatcgtttaatgatgcactcgttagtcagtcgcgttgacaagtgaggtggcctttttcactagggggaactcggatgagacgactcctcccactttttggctgcttggcaatctggcgcatcaaaatcacgggccatgacatcagtcggctgttgtcaaaaggaattgaaaggatgtttgatggcatgctaaattgacaaatgcatgcaaaacacttttcggctgccgcatttgcgcataccgtctcattattcatagctagtaaaagtcgcatgttgccgccgtgcggagatgttgctgccacttctgttgctgctgttggtgttgcgtgtaagttgccatgcaattggcaaatgcttcattccgattttataccactgttctccactgcggcaattagcaatcaaggggtgtgagggaaaagcctttccaagttcttttcttttctttgtatttttcaatatttaccttgcccgtattgtgtgcacctatgcaagttacaacaagtgttgctcttgctgttgctgcagctgctcaaagtcaaactgttttgggggtcttctagtcataaggtcaaactgcgcgcattatcaacgctgaagccgcaagaaaatctgcaataatttcgacactcgaaaaattaccaaatgattttgttaagttgcaagtgatttttaattataatgctattcaaatttgtatgcaagccaccgataaacttatttaaactatttgaaatttatgaaataacttgatgattctgaaacatattcgaggcacatatttttgtctgagtgtagcgcagcaacattatgcttaagcgctgcaagcgcttcgtgcttaaaagcgcgcgacacacacacacatattccggggaaacaatgttgctgttgttaggcccgccag
PCR verification status
Line verified as correct.