| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT59447 | chrX 9649760–9651864 (2104 bp) | Sp1, CG1354 |
      active |
trunk mesoderm anlage, trunk mesoderm anlage broad, ventral nerve cord subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | trunk mesoderm anlage broad | 2 |
| 9-10 | trunk mesoderm anlage | 3 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | ventral nerve cord subset | 2 |
| 15-16 | ventral nerve cord subset | 1 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0020378 | Sp1 | overlapping | BDGP FlyBase |
| FBgn0030151 | CG1354 | 23015bp upstream | BDGP FlyBase |
| FBgn0263509 | CR43498 | 27240bp downstream | BDGP FlyBase |
| FBgn0052698 | CG32698 | 32636bp upstream | BDGP FlyBase |
| FBgn0000233 | btd | 58170bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
cacaaaaacaaaatccctataaaaacaagcgataagaaccattatgcaattctaaacgaagacacctaaaacaaaaaaaaaaaaaaaaaaataatattgatataatattgatatatggatattgaacggggggaacatcataaatatatttctagtccaattatgaagtgtgagcgaaccaaaattgtaaagagaaaacaaaaatggtggagaaaacgcagggggggagggaaatttaaactctagcccttgtaaattagcatatgtccctcatttatttttgctaaccccatcgaaacgaggatatcttagacgctagtgctttaatcgatcccaactaaaactaaaacaaatgatggaagaaaaaccggcggagagcccaagctaaaccttaactaaatctgtttttgttgttttatttgaactaggcttagagcagatacttagatacttagcaccacacaacaaaaacaaaaaaaaaaaataaaataaaataaaaaaataaaaaatgaagcacggatgcaaaatggatttggccagtcctgcgaaacgtgggccgcatcagcaatttatcatcttcgattactttttttgtctatgtaaattaattatttaaaatacgaataaactatttaaatttcattcaaaataaatgtacaacaaaacgctgcgatttccatttatttgtcagttgaaaaaaacaaaggggcacgggcgaatgtgggtgggctgggaaagtatctgaatatggatggtcatggatgggcagaatcaatttggtaaatcaatctttgtatctgcgaataagcgtaaaatatgtttatctgattgagggtgattttttggggatgctaccgaactgctggacttcctgtcctccaaaatctcctcataccggattcatctggtcgttaacgacttttaacgctctcaatctgaatggaaggatgtgggggagctaaaaggtcgaccctggatgccctgatgtcctgatatcctgatgtgtgtgggtgatttaaattttattaccgtggctaaaaggcaccctcgcaatccggcggaacagattctcacccgtcaagtgggtgcagattgtttctatcgcaacgatcattccccttttcacttcgaagtggattaagctgcgcagttatttttcccgctggtgttttgacatcctcggtgggggtgtggtcgaccagggggccaaaaacaatttgccagggcaatgaattcaagattcaaatgaataacgttctggccgagatgggtaaactgggcgatgagtgctctccacattacggggcattaatgaaaagccctggctgctcacttaaagccatcaagaattaatgtcggactcttactgatttggtactgaaaatactactgaaaaattactgctaaatatgtttagttactgctcttatttaactattcatatgtttaactcttaaaacgaccaaatgttgtaataatctgcctaaatttgttaaaaaggttttgtatacgtggcataaatcatacgcaacgtttggtaagtgttccacgaaggaatctcaagtgcggtgaattgtaatgaggcaactatctctcccttttcaaaatccttgactcctgttttctgggtattgtgtgtcacatggtagccgcatcctgctgggcaactcatcctcatgctcacccactcccactctgcaggattcgggtttcaaaagagtgccagagcaagttgtaaattaaaataatgaaaaatacaaacacaaaaggagggggcatgtgaaaaaagagatagctaacgacataaaacaaaggacaggacatgcgtttggcatcgccttgcaaaggacatgggccgtctgtatatactatatatatatatatatagtggcaaaggaacagagtatggaactaaataaatcagaaaagaccaaggtagacctgcagttgagtggggccaaaggattggcgacgatgataaacgagcgacactgcggcgctgacaaaatcattagcagcgaactttaattaaaatatgattttcacacatttgagcggagttaggcgccagaaacgagatcctcatcacatccacacccattgcc
PCR verification status
Line verified as correct.