| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT62058 | chrX 14912673–14914883 (2210 bp) | hiw, be |
      active |
middle, yolk, mesectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | middle | 4 |
| 4-6 | yolk | 4 |
| 7-8 | yolk | 2 |
| 7-8 | mesectoderm anlage | 3 |
| 9-10 | yolk | 1 |
| 9-10 | mesectoderm anlage | 3 |
| 11-12 | ventral midline | 2 |
| 11-12 | foregut primordium | 2 |
| 11-12 | trunk mesoderm primordium | 1 |
| 13-14 | epipharynx | 2 |
| 13-14 | visceral muscle subset | 1 |
| 13-14 | hypopharynx | 2 |
| 13-14 | esophagus | 2 |
| 15-16 | yolk | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0030600 | hiw | overlapping | BDGP FlyBase iFly |
| FBgn0052594 | be | 5796bp upstream | BDGP FlyBase |
| FBgn0000535 | eag | 8652bp downstream | BDGP FlyBase |
| FBgn0030603 | CG5541 | 25468bp upstream | BDGP FlyBase |
| FBgn0030605 | CG5548 | 45141bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggcaccaaaaccgcatcaccatactgatcccgtatggtgaccgtcacctgggaaggccaaccgtagcgcagtggttccgtgattgtgttcagctcacatctaaagagaagggcgcagtattagtggggaacgcaatatttttaatttgttaatatggaaatgggcgacctacttattgggatccagtcgtgactcaggctgcaaccaggcggccaaacgggcgcccgacgatcctggcgcaccgctaatgaagtccttgaggaactgtcgctcatttgactgcgatctaaaaaaaaaaaaaaacaagtgctttgttataagatgcctaagccaacagagtaataaatacttaaaatatcaaatcttatcaccaatgcttgtttgctttcccttttatgcatcatacatacatatcatacatacatatcatacatacatatgtgcatcatcgtatgtgtaaacagtttcttgacatactgtatctcatcactctgaagttcaagacaaatcatatcccaattcgtcatctagctacatatatttgcattattcgaaataaaacatatgtacatatgtatgtacataatttcagtgactcaaatgtgatgaaaaccgaaataaaataccttttattgcaaattatgtatgcatgtgtatttagaaatattagaaatactctttgagtcaaccaatatttatattccaactaatgtaataatgttgtagaggtataaaatagacatgtgcaagtcagaatttcttcacggcttagacgcggggtcaagcgttagggtcacgaactgatcaggtagaatcccgatgcacttaaatccattccactcaaatcccatcccatcccatcccatcccgtccaatccaatcagacgcacacagcatcaaagttggaccgcccgtctgacctgcggttcgcaggcggaagaagtgcggcacgtagggcgaatggacgtggggcgggggttggctggaaagggtcgaagggcacgtaactgaacagcgggcggtgcacatgcagacaggcacacacatgcagcaacgtgtgagaacataataggacaacccactgaacactgattcatgccagttatcttatcgtacatacatatatgtaatagttatcttaatatacactgcgcgtcaccagtttggcgttgttttcaaggacttcagacatttgtctgcaaagtgaatcatatatgtatgtacatatttcttgtaggtaatcgaaagtaattgtagaccaaccgaattttattccggtgatcgatccaattgagtggcgtacggcttaccaccctcgtatacctttccagccaaccatcccaacaagttttctattcattccagaacttttacattttcgctttgaatccatatttttaccgaacttgcagtgtggattgtggcattttcgtgctgaaaatgccattccagatttctaaaaacgtttttaaagtagggaattgcagtttttaatacacaattataatctttcgcgttcagttttggtgttaaacagcatacaaaagtttgttgtccttaccttttaaattatggaaaatatttaaaacttggggggcgctaatctgatgacgcgcagtgtatagtatagaaaaacaacacgattatttccattttctaaaaatctgacatattctggcatttcatccagctaaacaacactttttttttgtattgtctacataatatagaatatatgcatagtacatattagtaatgaccgaatatatatattttatactttacttgatagtaaaattaatttcattagggtattgattatattgatcgttgttcagaccgtggaagttaaggatctagaatctaccattatcatacatgattggatccaatataagactatttgtagaatgtaaagagcatagaatgattataattttaaatagagcttaacaaatgttcaaacgcggtcaacacgtgactttactcgtgacaatctttccgctttggaaaatttggtgtgtaacggtcgcatttttgggggataatagggaagtgaaatagggaaatgggatggggaatccaaccgaaacacacgcaaagctgcgtacacacatttctatttacataaaatgcaaataaaacaatacaaaaaaataaatacaaatgaaatgaaaatgagtaacaaaaaggggagtggagcaaagtgga
PCR verification status
Line verified as correct.