Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT62233 chrX 15261471–15263550 (2079 bp) acj6, Pp1-13C activityactivityactivityactivityactivityactivity
active
brain subset, brain primordium subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12brain primordium subset2
11-12ventral nerve cord primordium subset1
13-14ventral nerve cord subset1
13-14trunk epidermis subset1
13-14brain subset3
15-16ventral nerve cord subset1
15-16trunk epidermis subset1
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0000028acj6overlapping BDGP FlyBase iFly
FBgn0003132Pp1-13C6378bp downstream BDGP FlyBase
FBgn0030634CG916412932bp upstream BDGP FlyBase
FBgn0030631CG622717418bp downstream BDGP FlyBase
FBgn0263257Cngl18600bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gggctaatttattgttgatttcagcgcaatattgggtttgcttttgcaatagaaataggagaatatattaacttgagtgttaaaacttagttctagttcttgcacatatagtgtatgtattaaggacttgtttttgatattttaattggtttttcttgaatgatttttttttgttttgaatagcgctctcttttcgagacctgaacacaagttcaaaatcctactcgaggaactgcaatcatggaggcaaacacgcatttcatcaacacccgaaatatgcgtttgtttggacttcagcgggtatcccccgaaggtccaccctaaagcagccaccctagttagcggtaagttgtttctaatgtgcacaaaagacaaatatttgctgttgtcgcctgtcgccgctggaaaaatagttgaagccagccggaaatggttgtggatatggaagttttggttagcgtgtggagtggcaatggtgagttaacgatatttacaaaacaatatgacgaccgcaggaggggaagggaattgaagtgaagggcgggcgggaatggagagtaaaaatcaaacaggtgcactaaatgaattcagtatgataaaccacttgtggttgaactccaggaactgggacctcggtcaggcgccccctcggtgtcctgcaagtatcctggccccgtgtatccctttgggcggtgcgtgcttggtaaaggactcaaagcgactctactcgattcatttcatatcgtttcgagggaaattgagccatatgttgcgaatactaatggacaggatatgaaccggcccggaagtatgtaagtgtaatttaaattgaattaagtgagcgagggttggttgggcatggcctggaaaatatggactaaccagatcggagcaaaagtttcggaccggaaaaatctgcgataaatgactgcaaagtgggcagctccgtaaccagaatcccgactccagcagcccgaatttcatcccagttgggcgctgaaattgataatggatattttgccgccgctgccgtaattgttacaaatgttctgacaacctgacaacaaacccgcccctttgcgagcatttcgagtttttatgatggatatgattattttaattagcattatatttactcatgtttacccttttgccgccgcctccccacataattggcttttcatatgctcgcaaaaaccgaattccaaattctgaaaaccgaaaaccagttggataaccagtagaattgctgttagttgtttgctgttagctgttagctgttttccttcctggctcgtaaattagtttaatttaatgagttttgtaatgctcctgctgctggggggggccttctgtcttctggcataacgattatgacacatgttaccagagtttctgacagcccacctctgcaattcactcctccatctcgaaagtttccacttgaacggtttgggggaggtgttccatgcgaaaggattttggaactggaagtgggtccagatggttttataagtagcactgagttaactacgtagctgccacaattagctggagttcgtaaactcgggctgacagaattttacctttgaaaccatctattttcaatggtaaaactggtggggaaagagcgacgagtgtccatctaatgaattatgcaccgatttactataactttggacctagaaataattcacaagaccaaatgcattaggagttcattgttctctcctatgcgtactatgtgaataatcttattattcttgtgtaagtaaatatttaaaaagtggagtaagtcatggaaatttgctctttacatttgcataagtttaactgaatcagaggtaaaactgctgaagctgtatggtatataatatttctgatttagaagtcagaggaaaatccccaattagatgtcgcaccaaagggacatttggttcatggaaagttcgtggatgtaaaggagtcgcaggatgaaatccacctccccgctgctgagaagaagttggagacaccacgaacacctggaagtgtatgcaaggatgcatcgcgacatgccggagcttctctaggtattggc

PCR verification status

Line verified as correct.

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