| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT62855 | chrX 16590128–16593348 (3220 bp) | CG4678, Sep4 |
      active |
anal pad, posterior spiracle, pharynx | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | pharynx | 2 |
| 13-14 | anal pad | 3 |
| 13-14 | proventriculus | 2 |
| 13-14 | posterior spiracle | 3 |
| 15-16 | pharynx | 3 |
| 15-16 | anal pad | 3 |
| 15-16 | proventriculus | 3 |
| 15-16 | esophagus | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0030778 | CG4678 | 36bp upstream | BDGP FlyBase |
| FBgn0259923 | Sep4 | 923bp downstream | BDGP FlyBase |
| FBgn0030773 | CG9676 | 3057bp upstream | BDGP FlyBase |
| FBgn0030774 | spheroide | 4351bp upstream | BDGP FlyBase |
| FBgn0030775 | CG9673 | 6689bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctggcctccgtagcacacgaacaacgcgccacaaactcagtcgaacttaaacggcgctggcaatcggacgcgttttcgaaaactcgctctctctgcgatttcattctggttttttgggaaagtgtaagctcgatgagatgaaaagaagaatccattgaaacgcgtaaatcttcctttgtcaatttgtcaagctcgcggcatatttgtttcaacaagttttcagtgctaatttgtttaatcgcgtaggctcaaagagaaactacccaaaaaaagagggagaactttgttttgctttctgtttgtttgcattttttttatgtgctcgaaattgaagcccggcaatggcagccgcctggaacaatgaaagttgattgaatattttatgcaaatttcccattgcagaaaaaaaggtgcgaagaacaacgagaacaacaacaacaacaacaacatcaacggcagctgcaagaataataatagaaattgctgtcgagcagaaaactggaaatccaaaggcagcagcaagaaatcaggtgaataccgaatacctgtctgtttctcgtgggaaagtttaagatcaaggccagggggccttaccagaatgggctggattgggcggacatgggctggtctggtggtgtggaaattgggtgggtggtgcaggcgcggccttgcggccactgccaaggtgaaggtcacattgcaggcgaatgtcggcgggcctgcactagcattgttgttatataaacacctcccactccacagccccgcaatccagcagccaaatggctcactaacccactgcgcatgtcgcctccttcgaaggccatcgcatgacctcaggccccgccacgcccactggcctccccgcctactttttccgcacagcagggggcatgatgatggggcatgtggtacaacatacatatgtatgtacatatccaggcatactctcacaatgttctcaattcatcatacactagtcattaaaatgcatcactgataatcgctgaaattctatatgcacgcaaagtgataaggattttacatttatattctaaatttagcaaagcggttagtcctcgaagcaagatttttttgaaataataatttcaaactgtaatacttagctcaacagtattagaattcattgaatagtataataatgtaacaaatgtatatatttcataacatttaaattgttcttctttatatctgcaatttaaattggactgtcactatttgcttggccgtaggtgtgtgctgccccttttcggcaggcttttagcattgaacttgacagtggtggtgagcgcctttaaccagtggctgcccacttttaagctaacaaggttagtgggttaactggcctgctccactgctaagaccgctcccgctcctttcccccctccaacctgctctccactcgcaactcttgaatcccccgtcttctgtctgctgccttcttctgcctgctgtcttcttctgtctgctgtctttagttttctgtcttcggactgcaaagagtcatgagtgtttctccacgcccggattcgggcaaacccgttaccattaacccgccgatcggctttgccatcgctctgaccattaaaagccacttacactgactttccatgctaatcaaaattgaagcccaaaataagaagaaatttgtttgccgccacgacatgtctcgacttttgaatgtttctctcgcgtctccagtggatttcgaactggccagtgcaagtgggcaatgcgaagtggatggcttcttggaactggcaccaaagtggagctggtgaaattgagccactccggcggtggggagatgataaactcggcgatttcttatcaggtttgaaccacactgagacaaatctgggcataaatgccaattgggcattggacaaatactttggtgggcagatactttttaacttagcgaataaaagttacgtttagtaaacaaaaaaaaaaaaaaaacgaagttattatgtgatatattacattagcgatcatatcttaagcagatatattgcaatagctctccaaaaagtcagcccctgaaaatacaataatatttcgaagaaatgcaatgctttaaatgcaaatgcagtttattatttaaatgcaattgttataaccacaaatgagccaatcccccgaatcaccgccaagatcgtagatcatggagttcttcaacttcaaaaggttcgatgactttgtccgtgaattgcattgactgacagattgatggactgattgatggtgcggcagattgacagccagccggttggacaaactgaacaaatcgtgccaggtttacgtggggtattacattgggataccgaaacccatggaggcacgccacgatccccagcgatccgataattgcgccccgaaaagagagcgaaggaaaacaaagaggcggtggaaaactgaggctgtggaaactgtggaaaagtaaataaaaagtgcgagaccagttaaatgaaaagcaaaacaaagtcattaaacgccgagtgcatggaaaaaaaaagaagtcagcaaagctgaaaactgaaaaccgaaaaccgaaaaaaagcggaaaattaccgagcaataatagaaagagttgggtgagtttcggagctgattttcattttcactttcactggccggcggggaaatgcggggaaaagcggggaaaagcgggaaaaagcggggaaaagttgcgctctgataaattgccaagcggccaaaatgggaagccaccaagtcaccaatccaccaagtgggttctaaaaagcggtcacaatccgctggctcgcaaatgagtcatgtagagatgaccccaaaaaaaaagggggatcaactacatacctcattagatcaactacctaccatatggatttaaatcgcacaaaaatgatacaaaagcataatatcataatatagatatttacaattggggtcagtaactttgaagttgaatcttaaactaatatttaattcttttattggcatataaaaggaaaaagggttgttattttatagaatagactttgaaattcctttgctgtgctgataatattttatatttattattgaagtgcgttttacaacatagtaatctgctatgttgctaaaaataatgtgaaataatatatataagttaaatagaaaaccgtttttccatgggaattttccgtgatatctttgcgtgatttccggacctcgtt
PCR verification status
Line verified as correct.