Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT63204 chrX 17253290–17255474 (2184 bp) CR43491, B-H2 activityactivityactivityactivityactivityactivity
active
amnioserosa, head subset, lateral epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10lateral epidermis anlage subset1
11-12lateral epidermis primordium subset2
11-12amnioserosa3
11-12clypeo-labral primordium2
13-14head subset3
13-14lateral epidermis subset3
13-14amnioserosa4
13-14telson subset3
13-14clypeolabrum3
15-16head subset2
15-16amnioserosa2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0263502CR4349119119bp upstream BDGP FlyBase
FBgn0004854B-H235083bp downstream BDGP FlyBase iFly
FBgn0011758B-H138221bp upstream BDGP FlyBase iFly
FBgn0030838CG544553783bp downstream BDGP FlyBase
FBgn0027602CG861154010bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gcttgggtttgggattgagtggcttgaatcgcacactaaatgcactgcaaattgtatatacgagatatgatttattttagaataatactgaaagctaagctgtcagctacatatataatgttaaaaacaaataaataggcttatccaaaatatagttataatattctagtgtagagtatatgttaccattcccaatttatttcgacccacaaaacaattcacaaaaagtgctccacttccgccttttatgtgcttatatttaccattactattttttgttcgttcgtttttgttttttaatttctaatttagttttaagcccggcactttggagactttcagccgtggatgtagatgttgctgttgcccgcggacatgcaactctgctttatgactcatgacaacatgcaacatgacgttcgcagctgattttctgattttctatgatttttgttgggctgtttgggttttgtggctttttgtgtgtgtgccttttaatgctcctctaacgagcataaatggcagatagagaacagaacagttaggcattttgtctcccactcggtggcagcagttcgttgacttcgctcagtggcccccgataattgccactaaaaatgtcaggtgctaaacgctatcagccaactagaaccacagcaccacagcaccacagcactacaaattataatgacaataaaaacaaatttacagattttcatttccatttccatttccatttcctaagcggggttgtttgttgtcgtctagtcggttggcccgaggtaaattaagtgtaggtaccaaaaattagtatcgcgctctacaatcgggggaggatcgtgtctatctagccagcgagatggatagacgacgcatttttatggccctgttctcttttcggcggggtcggaggtgccacagaccccatttgatacagccgactaaccgcgggccacttttagttggctttttaagctgggctcgagttcgggccaagagcaacaccaacgccagaccggaagcgatgcttatcgggcccattctccccggccaagtccgcttctcgtaaccacaccctcgtataccttgtatagcattttcccagtgcagaccactcgggatttgccaaaaacccacgggcaactgggctttccccccggtgatctaatcagcaaggtgaggtaattgtctgatcttgaaaagtagcagggcatacataggtattcttactcttaaatggtatttatggcttttcttatacgttatatagaatacaaggaataaattgtttaattgtaaacgtatatagttaaataaaaaaagcataaaaagagagagagcaagtttaaatgcatattcattcaatagtaacttaaaactttataaaattcttagagcatttgttcttcgcattaaatgccctttccgctgactcatttttaattgcattaatgtattttttgtgccgctactaaacaaaccgattaaaatatttaaatttcgtttgtcgagtgcgagaacaatttcgtttcaatccggattcgtttattttgtgcgcctgcgcgcctgataaatgagacaatttccctgtccgaggcattaacatatttgtagaatacatatatacatttatacaaaaatgtggatatagagctgaacaactgaacaattggggtggggtgtcatggtcggctgctcgtttaattgttcctgtcgcgcgaatttcggttcctggtcactgggaaaacgtcaattcacctcaaaattttccccgcttttaccgccctccgcgcgtaattttcccccgatcatgcagcttgcgtgcgtcgtcagctgcctgcaattatttaaatcattaaacagaacttaaccaactgttaaaatatgaactaaaatgcatttaactgttttcgagctgttttgtcaacaaagcgctgtcatcatcatcatcatcgttcagccaagttccacgtttcctgtcactgattctcgactcttcgctttcgtgtcgttcgttctgtcagcacgttcaacgcaattacctggccacactaaacacactcccacacacactcaggcacactgtaattgtcataatcgcattttgaatggcactttatggggcaggaagtgcggacggtcgtcgacaacaaaagactgaaagttgtagccatcgatcaagccc

PCR verification status

Line verified as correct.

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