| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT63546 | chrX 17890592–17892783 (2191 bp) | Sh, CG12672 |
      weak |
brain primordium subset, anterior ventral nerve cord primordium subset, brain broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | anterior ventral nerve cord primordium subset | 1 |
| 13-14 | brain broad | 1 |
| 13-14 | ventral nerve cord broad | 1 |
| 13-14 | midgut interstitial cell | 1 |
| 13-14 | midgut subset | 1 |
| 15-16 | midgut chamber | 1 |
| 15-16 | brain broad | 1 |
| 15-16 | ventral nerve cord broad | 1 |
| 15-16 | midgut interstitial cell | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003380 | Sh | overlapping | BDGP FlyBase |
| FBgn0030886 | CG12672 | 9338bp upstream | BDGP FlyBase |
| FBgn0030887 | CG6867 | 27311bp upstream | BDGP FlyBase |
| FBgn0030889 | CG15373 | 47512bp upstream | BDGP FlyBase |
| FBgn0013809 | Dhc16F | 67924bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gggaatgcccatttgtcatccttgaaactatgaagcaaaatgtgtttacaaaaataagtgcgacactctaatatatataaaataaactaaaacaaaattgtgttttagtgtgatttccaaatataattcattactttaacagcaagattaatttaatgtcaacattttcaaacgcaaatggcttaaaaatcactatctacaaaaaaaaaggaaaaagcaattaacttttttagaatcatacttcaaaaatcaatagaatatgtatccagcgaattttaaagttgaacaaaattatcaagtgggcccaattctcaatgatctgatgtaacttcattaatattttatgctcggaggacacgaaaactctgttatctgtatcacgaattctatttttaatggcttagattaaccgcatggcacttatttattgttacacacacttgcacagatattacgcacaagtaactgaaatttatcgaatttggccaactatgttggggaaacttctcaaaaaaaaaaaaacaagaaaaaaacgacaaaatcgcggattgttggaaattgaatttcctctattgcactcgaacaaacactaacggtaaagataatggttatggtgatggcaactggcgaacggaaactcaacgcagcatcacaacaaaattgaaagcggctatagggaaagtccaatcttcatgtttcacatttttccaaaacgtttccatggtaagttacccgaagagagagcgaaggcgattaaaagagagggagagagacacacacacacacacacaagcgcacaggcactgaaacaaaaaagaaagagaggcaactatcgagagtgcagcagcatcacgcacacacacacacgtatttgtttgttatttcttgtgatttcctttgatgaagatgaaggagcacgcttttcggcaagtgtgagtgtgagcgtggaacgagttgtgaattggatgccatttcaaggactcgcaggatgtgtgtgtgtgtgtgtataattcaatggcttagcccggattaaaacattaaaaatgggtctttaatgcgattgctactctcgactggttccgcgtgcgactgcgacgtttatgcaactggctgtgtcgatgccacattttcgccagctttcccccagcacgcacacacacacacacacacaggcaggggcacccacactgatataaagacacacgcacacagagacacacacatcgatagcgacagcatttgggtgcaacaaaagcaagaacaaaaattgattactaaaactgtggaaggactttggagcgatggcaaacaatgcaaatgaaactggcgaaaatgagaatgggaataaaacgttaaacgtttctttggcgccaccggaaccaccacatttcccattttccgctcttccacccgccccctgccaccgcatcatcccttttccgtttctccgacctttgccacctgtcagcccaccgggttgaaaggtgaaaggcagcagacggtaaacggcagacttcagacttgcgacttgcgacttcagacggcaggtgaaaagtgatcggggctaccaaattcagttgctacaattacaagaacaatgtgccgtatctgtacgtgtgtgtgtgtgtgtgtccgaatgtctctgtgtgtgtgcgagtgtttgtaattatagccaactgttccacattctgacacagagatatgcatttagcgcttggctttcgaacgacttgaggcttaggcaaaagtgcaagacatacgtgtatcgccacctagccatcaaactgaggtggctaaacaaaaccgagaggcaatggccgccagactagcgccaaatgccacagacagcaaacaaacaaaaagcagaaggcaaacgaaattgaaaccgaaacccaatgaggaactggaacgcagcgaacgtggaggcgttgcaagaaaacgaagtacacttgaaaaaatgaaacgaatctcgtgaaatatttaacatcgaaagagatttgtaccttgccgcataggaacacaattttataggtatataaaaatatatatatatataaaatatgtatacttagtctatatttcacatacatatgcaatcttaagctttagaatgtaatcaagtaatcaagacaaggcagaggtatattaagtatttgcaggagtaaaatgtgtaagtgaaattaaaatgacgt
PCR verification status
Line verified as correct.