| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT63713 | chrX 18197231–18199428 (2197 bp) | os, CG6023 |
      active |
procephalic ectoderm AISN, anterior endoderm AISN, anterior | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 4-6 | anterior endoderm AISN | 3 |
| 4-6 | anterior | 3 |
| 4-6 | A-P stripe | 3 |
| 4-6 | ventral ectoderm AISN | 2 |
| 4-6 | A-P semi-stripe dorsal | 3 |
| 7-8 | trunk mesoderm anlage broad | 2 |
| 7-8 | head epidermis dorsal anlage | 3 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004956 | os | 2156bp upstream | BDGP FlyBase iFly |
| FBgn0030912 | CG6023 | 10926bp upstream | BDGP FlyBase |
| FBgn0053542 | upd3 | 18603bp downstream | BDGP FlyBase |
| FBgn0030913 | CG6123 | 19760bp upstream | BDGP FlyBase |
| FBgn0030905 | CG15059 | 43682bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tttacaagcaaagggtatttgtatgaaaactcagtatatatatgggaatactattatgtcattgtaataataagtgtatttatttattaacaaaaaaaaaaacattccttttcttcacatagatattacatggagcataggtttctaaaatccagcaatagttcgagaatcgcattccatggtgaccgatcgatccatcatctggaaatgttgggatattcatatcgcgttgactggattgatcgtaccaataaattgcaatataattgcgttgatggcctaattgagttgccacttgtctgccgtgcgattgtgcctttgggtgcacaaattgagtggcaaacaggacatgggaccaaatagatacagatacatcctgttcgtgcggtataggacgcagtttggcgaggcgaaggccgctgcacggtatgggattcctggaaggtgccgcaggacaataaaaaacacaaaaagagattgggaatttgtgagttggcgaagaaaggaaaaagaggagcgcaaaatggcaggacaatggcaaaaagtggcccggcacaaaggactgcacaaatgcagttatcttgcaaaattgtcgacacaatgcgtgggagcgggacggcgcaatgatgggttattaaatgttgttaatctttttctttcttttttttttctgtccaccgcacccctgcgtccacggccaggcacatattcaaatttcaccgggaggaaggaggaaggagcaggtagtaggtagagtcgggcggtgcggccgggccgttatgaccaggccaaaaacaatgccccgaacggaatccgaaatccgaaaactgaaaactgaaataccgaaatactggtatgcccgtcgacgtcgagcctcttggcatttgcctttattgtgcacgctgtttaaatatttaccgagttttacaatatttatgacagctaaaaacataacaacacctacttacccaaaagggctcaggccaaaaaggggacacttgacactggactatggtcaagagacccgaatccgaatccgaacccgtacccaaaaccaaaaccaaaaccgaacataaaaaccataaccctggagcggcttaaagtctggacttccttcgatcgattgcaatcaataaacggcttaggcggcattataatgcatgcagaaatgtttttgctcagcgtctcgtgctaatccatttgcatgtcaacatctccgttttgcccttccctctgccctttctccctctgtttggccaggacacttaaggactcgcaaggtagacggcagtctgcttccgttcgctgagcgctaataatccgagtggacttggccataagttgccactaagcgccctaaacggagcttggcaataagccaaggcattaaaaagtaaatttgcctaaatccgcttaaaacaaagcggggatttctcgattccagactgcaatgcaaatcggtgaccaggacaagtgtagccgtgttttagttaaccccggggataagcgtcagctcatctgccccctgatcccggcaccttagcattcccgcaagagctaatgccaccgatgatgatggtgatcagctttacgagtatatgtagttctgatgcacttggcgcgaactttcattgagtggttccattgatcacagtccattcatttcctctgggtttctgggcacaggtagacaagcaggtggggatcggaatcggaatcgggatcgggatcggtttcggtatcgaggggaactgggagcctgacgtgctaatagtttgacgccgctggagatcataaaacccatgacccatggaggagccataaagacgcatccaaggcgcagcagaaagcgaatccgcagaaagtgggtcaagggaattggagtaattgactcccccaggtatagggattcaatgtacgcgaaagtgttggccacataagataggttggttgataggtttttgatggtaaaagatataaaaatatatagaattgaattcgatattcgggtatttcaattttgaaatataagataaaaacgttgaacctcaaaatgggaagtacgaagttcttttccatcataaatttaagtatatccaaatggatatatgtataccatttattcccaaaaatgaaatgcaatccagatttattttcaaattcaattcagtttattgttcgctttattccgctgctgg
PCR verification status
Line verified as correct.