Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT64485 chrX 19721697–19723813 (2116 bp) pico, skpE activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad, brain primordium broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12brain primordium broad2
11-12ventral nerve cord primordium broad2
13-14brain broad3
13-14ventral nerve cord broad3
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0261811pico2551bp upstream BDGP FlyBase iFly
FBgn0031074skpE3585bp downstream BDGP FlyBase
FBgn0026175skpC10965bp downstream BDGP FlyBase
FBgn0026174skpD14281bp downstream BDGP FlyBase
FBgn0031078Nup20524550bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

actcatttgcttggttgctgcgtgcaacaactcggaatatctaactttcgaacccttttttttcgtgaataaatggttttccccatttttgtcaaaattcaattaaaattgtttaacttagacgaggacggaaaaagtaaatacaacaatcttacattatacatatgtatatcaaattgtatagcaaaaaataaaaaaacgaaagagttacagcggcgacgtcgactgcgacgcggcagcgctgcagcagcgggcatttcaaacaaaggacaacataacgagattaacacacacacacacatacacaaacaagcagagagccaccccgaaaaaaaagtaaaaatgccaagcaaaatcaaataaaaaacacaaaaaataggcagagaagcgaaaggcatgtgagaagagagcgaatggggagaggaattgagaaaaaataaaacccgcttaaattaaacccacctactggccaccatcagaagccaccacccaactcggaaccacccaaaacccacccaaaacacccaaaagcaccaacaaaaggaagctggagctggagctgaatttccagctggacagcaaacgcacgaacgggttgaagggttcgcagctccgagcatcgaacacgttgatgaggatgcggatgggggaagtagcaggagtagcaggagcaccaggacgaccaggaggcaggggtcaggtcaggaggtggtgccgttccgcccgccggcacttgccaatttaaactagagcgaatgccacgactatccgatacccgctagaatcacattcagatgttgcgaaatctatgtgctataatctacataagctataatctatacatatatgatttcgggcttaaaaataaacaaaatatattgggattttaaaaccagcttcaataaaatatcaacgtctttctataaataagtattattttaaacatttatattttgaaaatatttacaaaatgtaacgaactttgaatcaattgtgcataagaacaacttatatatatatttttttttattttcgtttcattggtatttcttcaaaaatatgaaacagatcattgaataaaattgattgtgcaccgtctaaagttattggtgtattatacaaaagatataatttgaagttatcaaatgtgtgctaattaaaatcaaatcaaattttaaaatttcaattcgcttatttaattatataatataatataatataatatataaggcgtttgtcctccaaaatttacatatatatgtatgtagttccaaggtttccggatctgctggctctcaacccaagacgccattccttattccagtttcacataactttggcccgaatttaatagataccctgtaatgtccgtctaatgggcataaacaacggttggttgcagagaggggggggggggggtggtgttggtgctacaaggaagcgactacgcagcataaataaaatgcctgccaagcaaaggtccgcagacacacacactcccacacacatacacgcatggagagcaaccctttctctgcatcttcgtcttcttcttacttttggctcggccagtgggcagccagtgcgtggcccacaccaccccccaccccccaccactcacccttcgaaaaaaaagaagaaagctcgcaaaaaacgtccaaaaaaccccacaaaatgcggcaaggaaactgaaaattatgtcgactgcggctgctgccgctgcctctgccgcagctgctttcgctgtcgcaggcaacgtcgacgtcgacgctggcgttttggggcagcgcaggctcacatccttcgaagcggcgatcctggtcagttgcgttgggagggcattaaaatgcgtaaatttgcaaagtttcgcttattccctgcgtcttgaaagtgggtgtgtgctgcgaatgggtacagtggagcatggatatgcacaacgggataattttgttattgatatttttacattagataaacgcttagtgctgtgcagaagcgcccggtaaaaaaatgtccatacccaatgagcttcatatttgtattactcatagttatggccatcaatcctgagttgaaaactgatttttgaagtgctgtgcactgtttaaaactaaaca

PCR verification status

Line verified as correct.

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