| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT6449 | chr2L 12614109–12616353 (2244 bp) | nub, Ref2 |
      active |
gap, posterior, ventral ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | gap | 4 |
| 4-6 | posterior | 4 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | gap | 3 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | brain anlage subset | 4 |
| 9-10 | hindgut anlage | 4 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain broad | 2 |
| 13-14 | ventral nerve cord broad | 2 |
| 13-14 | brain subset | 3 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0085424 | nub | overlapping | BDGP FlyBase iFly |
| FBgn0032439 | Ref2 | overlapping | BDGP FlyBase |
| FBgn0265806 | CR44595 | 30560bp downstream | BDGP FlyBase |
| FBgn0265807 | CR44596 | 31252bp downstream | BDGP FlyBase |
| FBgn0265808 | CR44597 | 42504bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
cctggaactgaccggagcagcagttgctctctatggccacttgaacaatgccagcaaggatgtgcgagatttagagcagtgtctgaaattgcaggacccaaatggtgagtagcaaagaactattgcgatggaaattgaagttaagaaggttttcaagaaatacagcgagtagggggtacatggctgatattacattttagtatcattttagtataaagcaaatcgctttataagttattacaatcatcgaaatgtcgcatagtatctaattacgtataagaaatcctacaaagtcaataattaattttgcatgcaaagacgttaagcccctcatttcaaaaatatctttacctttttgtaaatgtcattactttgaaaaaaatactttattaggcaactgtcctctgcccaaatgagagataaaggcatgcaaaaagatattcattttttaccttaaaactcgtgggaaacttccgcaaagtaggacccaagaaaaaattcacaaacaaagtaccttgaattgtgttttttttttttgagaaaacggcacaaaataaatcaaaaccgttagcaaccacaatcggagatctatgtatactcaaaatagtaaggaaatgaaagaacgcaattaaggaaactcgctataaaactcccgaaaaaacgaagcgcagagaaagtttcctaactacccctaagtaaacagaaggaaacccaaattttcatgctaaaaattgcataaaaaaagcggaaaaaaatacacttttgggggtaggtaaacgcctcgcatatgcatatacatctcaggactctgtactcactacctgagggtcctgccaatgtatgtccttacttctctggggtgtcaaataccagcaaagtaccgtagcatgttccttaccattgccattgtttagctccgctctatcgtgtgttttttaaggaatattttcttatcgaggtaggcagacaacgcaattgatttctgttcttttccaacacaaaaaaaggaaaaacagaccgagattttcggttaggacataaataagaatcaaagaatgtcatccttcgacatcgatgattcggtgcttcatcatgttccccaaaacaatggcaaagtctgaattgaagttgccatcggagatatgtaaaaaaccttaggggattgcgatgctaagtatcatgaataattttgcgccaagaacggactgcagcagcttttccatttccctcctcattttccgaatagctaccctgttcagtccaaccccaagttattttgagttcaaatttcctataatttcaaggaaaattgtgagcggatttttggagatgctaagctgccgattagaacgagggtcaaatttaattaacgcacactctcccactgaactggggtgagattttcactgcagtttatatttgctgaaagggtgcaaaaatataatgcacaagggcagatgaatttttaaattacatttaaaattaagaatattgcaagccattcgcttcatatattctcctcttgaataataaatgttgccaaccaattttatgtaatctttatcttataagatatataccaaaactataaaatgttttagtgctagataaaactttctttttaccccaaattcagtttcctcttcccattaatcaatgcactaaaatctaaaaatcaggaaacccacaagaacaagccccaaaaaaaagggagatctcagtaaaatacaaacacatgccaacgtgtttgctggtcgaaagaactttacgacttcattagacatttcacttttcattattttctcaaacaatttaccaagtaccctccaaatgggtacgaaaattccctttcctttcctttttccttttttttaatattttccggctgccccaataaaaatgttgtttaccagtctcaactcttctggacttttctgccttttttatgatctttgcctacattgacttaagtaattctcggcaacgtatttccttttacgatagtccgcaaggacgatccgtagccataggtgagtgcgaaagggtggggcagtgtggagcgaaagagatagagatagcgggcgagccgacaaatagttttgatattttttatggacgcgcacagtaggccacattggtgcagctaggagttaacgcaaataaaaaagtcaaacggtcagtaagtcaaaagcagctataaatcaactgaaggactaggtgataccctagaggcactgctcagaaa
PCR verification status
Line verified as correct.