| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT6463 | chr2L 12639959–12642267 (2308 bp) | Ref2, nub |
      active |
posterior midgut primordium, anterior midgut anlage, posterior midgut anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | anterior midgut anlage | 3 |
| 9-10 | posterior midgut anlage | 3 |
| 9-10 | proventriculus anlage | 3 |
| 11-12 | anterior midgut primordium | 3 |
| 11-12 | posterior midgut primordium | 4 |
| 13-14 | midgut broad | 3 |
| 13-14 | proventriculus | 2 |
| 15-16 | midgut chamber | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0032439 | Ref2 | overlapping | BDGP FlyBase |
| FBgn0085424 | nub | 11825bp downstream | BDGP FlyBase iFly |
| FBgn0004394 | pdm2 | 17206bp upstream | BDGP FlyBase iFly |
| FBgn0032442 | CG15485 | 27289bp upstream | BDGP FlyBase |
| FBgn0032444 | CG5525 | 50377bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
atgggaacattgcgtttttagcgtgctcaaaatgcaaatcactacttcccattttttatggacactcatagttatttttatgtgaaatttattctatgggaaaattgcaataaatttatgcgaagaaacaatatttattgaagttagtaataagttatctgcaaaatcaatattaattaattttcatgttcccatgttgacgtcgcttatcagcctgcgcataatatgataattattgcattttaaatgcaatttatgtaattatttgtctttcattaagttcaacaaacattacaagataaacagcacggccagcgtgcggcaaacaagcgaccaaggaccaaactggaatccaaccgacgacaatccgccagatacgcgtcattagaagccatcgcaagagcagaggtaaaattgcatatcgaacgctcgaaacgcataaattaagatccgaccagtccccagttgggcaaaaagtggccaaccgaacagaatgcagataccagatacaggaaccaactgctgctgtccatcgctcactggatgtggctgcatctcctccgactccacttcttgtcgctggatgagcatgggagcagcggacccaaggatgggaccatggaccgccggatgactgcgcccagagagcagtttgtcattgtgactttggcaacaagacgaccagttggcagatacaagggcatattagctacagtgtcattaaaatgcaatagaaattagaatttaattgcttggtaaaaagctaatattacttgaacacagccctttagtctgaattttgaaaaataaaaaaaatatattatttaaaaagaaatatttcatttaatcgcactttagactctagaaactatctaatattaagtttgatgacttagccaaacgggcttgaattccatttgggaattttactaaggaaagtttactaacctttgattgttttcatattgtaatcctttctgacaattctttttttcattatgcctcttaaaaatatatttaatttttaatttacatatatattttttagggtattttacaaaggttctttaataccaaactccccagcacatgcaatgtaaatttggccactagtgtgtgtgcgtgcacctctggaagttaggatcgttttttctggcaccgcgagaggcttgcatatttatgttttctgcgatggatggcggtatccaatggattgagaagccctgaactccatcttgaatcttggcggtgcatgcaaaggcgatgggacaaaaaaacttgattgattggcctgccaacggctggtgattgggggttgggggctaaaaaaaaaacgaagagaatgcaaaaatctttgggggagccatataaaatggctgactgaagtgccagcccgaactgcgacttttcgctggcacttccgcttgtagccagtatcgaaatgcacttcgacttggactttgccttctagttctagtgcatatattcctatcgatacttaattttttctacgggaagtcgccgctgcatttctaggaatttcaatatttgttattttatatcagtcgaaaaaaaattgagataagcgcttgctgcatcgtcacctgtgaaaaggtgctcagcgtaaatatcataaacaaataagaagaagtataaattcaacaacaacaagaacggacgaaatttgtttagacatcgatagcaattacaatcgctacgttccgtgcgtttccggaaatttattaattggttgttccctcgccaccccacccccctcccaagcaatttgaattgaattacgcgcccgattattgtgtgcattatcagtgttggcccgatactctgatattccgtatatttatttaggccatgacaggtttgtccaactccataatgaaatcatgtcccacgtccctcagatattcccagcaatatcaatcgctcgaatatcgttcacatataatcggtcattccgcatagtatctgtctatcggtcgaacccctcgtatatctttcgatgtatgaaatttaaattctaaaaaatttcacttgcctcggagataagaaatgccttccagtcgcgtttattgatttaaaaaaaaagtgtttagtttctattttgcttatcgcactggggttttcatatttttcgaatatttaccatcgattatgtggttaattttccattgatattcaggcacataaagtttccgacctgttcataaatttttatgaacattttaaaaacttatttatgtttatgaagctgtctcgtttccttgcgaggggaaacaaaaagtacgcagcca
PCR verification status
Line verified as correct.