| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT6477 | chr2L 12665181–12667293 (2112 bp) | pdm2, CG15485 |
      active |
dorsal ectoderm AISN subset, anterior endoderm AISN, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | dorsal ectoderm AISN subset | 4 |
| 4-6 | anterior endoderm AISN | 4 |
| 7-8 | ventral ectoderm anlage | 2 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | anterior endoderm anlage | 4 |
| 7-8 | dorsal ectoderm anlage broad | 4 |
| 7-8 | amnioserosa anlage | 4 |
| 9-10 | lateral epidermis anlage subset | 4 |
| 9-10 | tracheal system anlage | 4 |
| 9-10 | anterior endoderm anlage | 4 |
| 9-10 | dorsal ectoderm anlage | 4 |
| 11-12 | not active | 0 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004394 | pdm2 | overlapping | BDGP FlyBase iFly |
| FBgn0032442 | CG15485 | 2067bp upstream | BDGP FlyBase |
| FBgn0032439 | Ref2 | 18826bp downstream | BDGP FlyBase |
| FBgn0032444 | CG5525 | 25155bp upstream | BDGP FlyBase |
| FBgn0032445 | CG6153 | 27812bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgatagtttctacctgactgttggcccggctaagcttaactcttaacttggcctgcgacgacgcccctttcgttcaatttcggctgcgatggtggaggcagatggagctgatggccaggacgaggacgatggtgaggttgatgatggtgatggtgggtcagccagttgggttactatggaaaggggtgatgggtgaaggttggatgaggcattattggataagcagcggaagcaggttgccgtgccgcaagaggcattctgcatgtaattatggaaacatggttttggccagttgtttgcacaggccgcaatgtcacagggttgccaagtcaacgagtaaaaataacttattgcttaaaatgaaaagctgcattcgtgtttaatgtacttctaccatcttggcatgaatattaaacaaactaattttaagttatatattgaattatattgatgtacttatcttttcaaaacctggcaactcttttagctcactatagccacaatcccgtacatcacccacccagtgtggactccacccctctgtgctcgccaagagcttcccatagcaagttgattttttattacaacgactacgcctttcgaattactagcgacaagccctctttgaaatggtttacataaacggattaaatgcgatcaagatgggggatctggttggtcgagaagtgggaggaggcggatatccaagaacctgtgccagaagattacaaatgaaggctaatttgactggtccattgtgctgggcaaatgcaattatgagatagagcactgccgtctcgaatttcccagccaagaagattttgcaatttgctcgagtctcgaagaccacctccacgatcagttgcttgatgtgggtatatgccagtatgccaggattgtactttgcatttcctcctcgtgcacaaaagccattaaattaatgatctatctgcaatgcatgagccagattgttacgacctgccaggagtcaggatgtcccgctgcgaggatgcaaaaggcagcaggatcggcttacctggtcagctaataagagacctggcgccgaaaatccataacaaatgcacgaaaatccgttatgccgtcgctcggacggccgagataagcccgaatatccttaagcaaatacatatccttatttcgtatgcagacggcaggctcgatccaacggttttggcttcctttttgactcctagcccttggccgggctaacacattcggggttttgttccccgtatctgactctcaagtgacgactaatgatggtaaaaactgtttttctttttgggaaaaacagaacacgacaacggttttccaccagaatcctgacgttctgcaccttttcttttagccggtgactttcttttcgctctattgttgcaccttttgttcgtcggccgaaaatgccattaattcgtaatgagaaaggtgtcatcgctgcaaagtcaaagacaaatattgccaggacccgcccacacttcgagttgccctagccgatgggtggttcctacggcaggttctgcatcaaatcaattagtatttcggctcttttcgattgccatcagctgttccaagtggggggcgttagtttaggccataaaatatcgattttctgcttttttcagcagaggaactgcaaagtcgctgatggctttcaagcggaaaatacttggcctggctaaatgaagacgtcatcggagcagtaaaaacaatatttattcggatttcttattcccagatttttgcaacgaacagaaatccttaaaaatgagggaacagaactttggaaaaatgaaatattatatctaaataaatagatctcttattcaatcttcatgtttacttgatactttttaatactttttctataaagcacttcattactttcggctactcgtgcagtattatttcctgttacaagataatcctaaaaatataaaaatagtgacataatttcttatatctttttatgcatttatctcttgatagcatttcaaatatttcccaatattaaagccaactattataagcaacgccccaaaaatttttcacaaatcgattttatttcaccaaaccacgcacttcttgagcggat
PCR verification status
Line verified as correct.