| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT6478 | chr2L 12669220–12671417 (2197 bp) | pdm2, CG15485 |
      active |
ventral ectoderm anlage, brain anlage broad, anterior endoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | posterior | 3 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | brain anlage broad | 4 |
| 9-10 | clypeolabrum anlage | 3 |
| 9-10 | segmentally repeated | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | telson | 2 |
| 11-12 | anterior ventral nerve cord primordium subset | 2 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 3 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004394 | pdm2 | overlapping | BDGP FlyBase iFly |
| FBgn0032442 | CG15485 | overlapping | BDGP FlyBase |
| FBgn0032444 | CG5525 | 21116bp upstream | BDGP FlyBase |
| FBgn0032439 | Ref2 | 22865bp downstream | BDGP FlyBase |
| FBgn0032445 | CG6153 | 23773bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
aaacacggccgattaaagtgagcgatattaacgtggcccacaaagcgttgaccatggtccaaaaaaacactcgagtgagagctataattatattcgagttgcgcgcccggcagcagacagaaaagttctaaacttttttggcaacgagctttggcaatttatacaatcatgatcgggccaaaaccaaaaaacgtgggcattcgggtcaaaggggggcactgagcacacgcttcagtggattaggtaatacaacacactcggattcaccacagaaatcacattagtggaacaatttatggttctaccttcgagctgctgaatcttccgcacaaatcttggcattcttcaattaaccgcaattctccaaaagagttcttatcactctagaaagctccggctgctcccgaaccgctgattttactattttatcgctctttggagatctcatcccgaactgtttctcttcgaatttgtttatttgttttttcagtgttttgttttttttttttttttgtttgtgaatgtcacatgttaatgaccccgttccgaaataatcaccgcaattataatgcaaacatttctaaatggtttttaactctctcatctcgtcaatttattttttatatatttatgtgttgcgtatttgtctgcgaatagactcgttacattagtcagtagacagagagaaatttgtggagatggggccttggaaaaagcgcttggaaattgtaccaattttaatgagaaaaaacggaatcacacaaaattatggtataaaaatagtgctatatttcaatttcagtttgacaaatcaatttgtgactttttatagcattttaattttaaatggtgcactgaaaaataaatgttaaatattagggtttatatatatggggaaaataattgttattcaaagaaaagcaaaaaaatactgcccaaaaatgaaatgaaatttcaataaaaatctcccttttatgattacttatgaccacatctgctgttagccacatattttaataacctttaagccatcacgcaatcagccaagtgcctgttgtgtggtccgatttctcaattaaaagtactttcatagttccatagaaaaatcataaaaaaaactcatttcgatcaacgaaaaacagagatattcagcgaatttccttcgctgccattgcgtaattggaaatccttaaaggatcgaagggaacaagccaactgcgaatgcattgagttcctgacacttttgcggggctgcccctttccttagacccgcgtttcactttttctaatgtgtttgccagccggtgcatgcaacaaaggagcacaaaggataaaggatattgccgcaatgggaaatcaaagcgcataggatagcaataaagagggaccaggtagtgagcaggatgcgcgttaatcgccatgttgcaggtaaatataatcgcacaaagtaacaatgccaaaaaaaaaatgcggggaaactggttggcatcggcaggaggatcccttggagcgccttcgattcagttgaaacagcttgccaggcttagggtgcacggggccaaaggatgcacggcatcagtagcaaattgagcctgaaaaaaggatttaatgttcagttttttaacaattgcggcttgtgcggctagagcagcagctgctcctccattggcaactgtgcaagcaaggcatcctttcttcgtcccctcatttgattgaaactttcacctttggatcttcatctgtcagcgagagttttccccctcaacagattgcatttcaaaaaaggaccttgactggcacgcgcattcaggcacattgacaggaccaacgacacaggaatcgcttatagaattcaggaagcctttccaattattgaaagtcagctttctgggccgaaccgccctcatttcattatcataatcctcggcacgcttagcaatcagtggtgacacaaaataactaatataaattatttttgtacattttattatcatagagtaaaagtaaaactataattgcaaggctgtcgtgtagattaaaatgaattttttaaagaattgacatgaattgatactttcaatattcagtaagaatatattgaatataactattacgaaaaacatatatagtatccttgttttagctacatttgaatatcttggcttgaaacaagctaggttcgctggcacagttcgcat
PCR verification status
Line verified as correct.