| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT6483 | chr2L 12678950–12681044 (2094 bp) | pdm2, CG15485 |
      active |
A-P stripes, middle, ventral ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripes | 3 |
| 4-6 | middle | 3 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | trunk mesoderm anlage broad | 2 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | brain subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004394 | pdm2 | overlapping | BDGP FlyBase iFly |
| FBgn0032442 | CG15485 | 9237bp downstream | BDGP FlyBase |
| FBgn0032444 | CG5525 | 11386bp upstream | BDGP FlyBase |
| FBgn0032445 | CG6153 | 14043bp upstream | BDGP FlyBase |
| FBgn0032446 | CG5780 | 14922bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttcagggttgccatcctacaaccagccatggaagcttttcgagaagtgtggctagagttgtcaaatgcaaacggatttgggctttgtgaatatgatttgaatatttaaataggaaacatatttcagtttttaaggatcgatcattttccaaaaacggatttaaatattaaaattttaagaaattcggattaatttattgatccaactcagtttaaagttttattgactcttcaaaataaaacatagccacaaacaacttaccgaatgaaaaccaagtcgtaacctgatttattgtaccccgtacctgttacaaaaacttttcactttctcgggcaataaatttggtcagaaagagcctaaggacgaaaccagttcagaacacacaaaggtcaccgattatcattacacgcccacacattatcccaggtccagatcagatggaataccatatagaagaggcacacacaatttccctatcagatgaacgatttcatggcgttttgcaacagatttgatgcgatgtcctgctgctgacggtgtcctttttgggcagctgctgcccttgagtgtcccactgtgcgagcgtgtgatcgtagtttttagatttcttgtgtttgcatttgcatcctggcagtgtcctttttacctgtgtccgagacgttgtcttttttccataagggtattttgcatgaaaacaaaggagaaaggaaacgctgttttttttctccatattcctggcatttccttcgttttttagggagaaaactattttccagcctaggacgtgcataggtaatttgcatggaacaaaggaaagaaaccaaattagccacaaaaggcaaattttctgtaattacatttaagccgaaggtgtgtggatataaaaagggcgagcaattccagcatgcagatcatgtgcacatctaaaatcccaaagatcctttgactaatgccacttgttatcctcccaacaagtgaggtgtgaggtcaaccaccgcctccaactaagccgaccccaatcccatcgggccaaaccattacccaaccacaaggacaacgccatgccaatgtccaatggtaatctgtatatttatattgtcctgcactggacattatgcacaaggattccccaagtcagagcgtcctcacacaatatattgtcgtaaaaatatgttacttttttttcctactgcccgttgtccttctcgggccaggattctactttgcttacgccccgagggagctataaatttaatatctactttgcaaaacaaaaaaccaaatggcacaaaaaaaaagagctgagggaggatgagaaaggacggtgggaaatggataaaagatggtgaggatttggtcccaagtctttggaaagggagctagtcatttaaatcaaaaacgcaaagttgtagaatactataactatagctatttaagattccgtggcaatactggcagtgcctcttgcttaaactataaaaaaaattgcgtgaaaactactttgagcacaatgccaaccatttgcactcggaaattgactcttaaaaattttacaccagcgagcactcagctgagagctggaaacatttttgcatgttatatacgccataagaaatgtgttatgtccgaactcctaatggacattttacgagccagacatgaaaggaaaacaccctgacaacaggacaccatccccacttctggtttaagaactgctcgtcctgttcatatctgtgtagaatgacgagtacgtgtcatttgcatttgaattttctactgttaagtattattaaaaattaaaaacatatttcatttttctcattgcagttatgcggcacatgtcgaactcaccaacaccgccctcgccactgcgttcgctatcaggtaaataaatgtgcatataatatggctaatccttggccagcattcagccgtcatgtcctttttatcctgctgccgactcgtggcggaacgtggctactttgtggctaaattgattactcacacgacagacaatttttatagttttcagttttcctctttttttgcaatatgcaatcagccacgcacccccttttccgcatcccctatacat
PCR verification status
Line verified as correct.