Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT64878 chrX 20506888–20509112 (2224 bp) RunxA, Cyp6v1 activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, ventral nerve cord subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12ventral nerve cord primordium subset1
13-14ventral nerve cord subset1
15-16ventral nerve cord subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0083981RunxA12089bp downstream BDGP FlyBase
FBgn0031126Cyp6v121923bp upstream BDGP FlyBase
FBgn0031127CG183532467bp upstream BDGP FlyBase
FBgn0031128hydra34971bp upstream BDGP FlyBase
FBgn0264444CR4386250958bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

aacgatccgggtcagaaacaacaaatcattaattatccgtgggacgtcgccggttttgatattctatatccagagttccgatggaggctgcgccgtgtcctggtcaagtgtcctgggatctacggcactttttgctcggttgaccgccgctgccgtttgtcattcaagggccggaagctacaagacatttgtgtcaggccgaccagaccgcttggcggcctcaagtgggccacttggccacttgaagtgcaacaacaaacaaggatcggcgcaggatactaggatgcagacccatttccactggcacggatgccaggcgaccacacacacggtcacctcggaagtccagcaaagatcctttgaagttgccccaaaacaaaaacggaaaacccattgaaatttgcatatgtttcctgaagcaggatatagataaccaataacggcattcgctgggggtttctgtttaagtttacagaaaaataactgttgctattgatttataagcatagctgcaaatttaataaataatatagatatatgtaaaatataaaataaccaaataaattaaaaaaattcatgtacgaaatagttttgaaaatcaataataacgcagaattatggattataagtcatgtcttgttaatctgattacattaaatatatctatatgtgagctatttttatttttaaacaaatttatcagcattctaagtttgtagaaacaacattgtaaatggtatatcctgataacgttacaaatgttgacgcttaggtaaataaactaatctaaatacctaaaaaatacaataaaaaaaactgttaacgaattgagtaacgcataaagttgaaattagttaatgaaagtctttacgcacttcgacagaataaaagacacggtttgatgaaattgaaaacgccaaggacaaggaaatccacccaagctccccaaaaagaagcgccatgtcttcgaggtagaactttttaccgcccccaggcacaaccctttcgctttttaagccaaagcgatggcgccaaagctttcgccattttaaataaaaatgcgcagcttccgcggcgctgcgatagatggcgccaaacggagtttggcctagtgcgaaggaaaactttaagtatatatatttaaaagagaaatgcaccgaattaaataggcttatatcaagattatatgtaacatttaatttaagacattaagcaacaatttataaaatatatcatttaaattatttagctatacaaatatcatgaaattttagattgaaactattagcacgttgaataaataccttcccactgaaactaatagttaaatacattctctttaatacatccaaggtttaaaaatgctgagctgggttttccaatcaaaaaaccagacgagtcttctcattatctttccctaatcaagctttaacgagaagcaaactccgaaacaagaagaaccacacacgtcgcccaccgcaaaagtatatgcccaaaatgtgcgtccgagaacggcatgcacatccacaaaacgagcgccaaacccccacccaagccccactccacctgcactttcccacgaaaaccgctcgaatgcccccattcgccatgattttgcgcgtgcaatttttgattgcaatggcccagacttctgctgaagttcgatgggggacttaaactactccggcactggtccgtccgctcttgcagcggagaaatcgaggaggagggttggttagtgaggggatattggttgggtgatgggggatggggataggctcactgaaccggaaattggaggtgtgcggcaaaacacgacgtgacgtgacatttcctcttcgtcaaaatgtcaaaatgcagcccaacggcagccgagcggcgacatgaatgcaaacaaagggccaactgcaacaacacggccatgccatacgatattaatgagcattttaatggtcaaatctctgcactggatggccgacgcgcctgtgggcctgcccagtggtccaggacttaaaggacatttggcggttggttgggcattgtgtttaaggcctgccttaagggaatgccacgtttggtcgtttcgaagttaagtttacttcatcaacgataattatgtattgctttcttgaatttccaacattttattgctgattatgagtgaacacagtatagagatactactcaaaagttggactacaaataaattcacgaacacaagttcg

PCR verification status

Line verified as correct.

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