| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT65290 | chrX 21303413–21305567 (2154 bp) | CG42343, CG10918 |
      active |
trunk mesoderm primordium, trunk mesoderm anlage, ventral nerve cord subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | trunk mesoderm anlage | 2 |
| 11-12 | trunk mesoderm primordium | 3 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | brain subset | 1 |
| 15-16 | ventral nerve cord subset | 2 |
| 15-16 | brain subset | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0259245 | CG42343 | overlapping | BDGP FlyBase |
| FBgn0031178 | CG10918 | 3131bp downstream | BDGP FlyBase |
| FBgn0266355 | CR45003 | 21841bp downstream | BDGP FlyBase |
| FBgn0031176 | CG1678 | 29649bp downstream | BDGP FlyBase |
| FBgn0028583 | lcs | 35088bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgccccaatttttcgatataatttgtttttttaatcgagtttaaaatatgtacatttgaatcaatgttcaacgcttcatgcaattgaaggtgccactaatgttagcccttttaataagtattagtcaacattttagctgcactcaacggcaaatagccgtctcattatagagcgcaatgtcccatgcccaatgtttttttttccccttttttgccttttttaacatttgtttcattctgcggttgctggctgctagcaacaataaccgaattgctgctatcattgtcgttgtcagttgacagttgtgtcataaaataaagttgacgtcactgggaaaaaggagaggctggctggcagcaaaaaagggaaaaccccaaacgagccaagcgcgaaatttatacggcggcagtgggtaaaaaatgctggaaagcaggacggcatgcgagaaagctggagaaatgtcaagcctgtttgcgttttatttgtctcatatttgcttttcactcaattcgctttgttaggttgattttattacaaagggggagacggggagtgggaagtgggaagtggcggccgggattgggtggtaccgccacccacccacgtttccctcatcgccatctttgcagcataaatgaaatgaaattgaaaacgcaatcgttttccacatgtcgcttaatggcgggatggtgctgcacaaaaaaaaaaaactctattcaactcgactcgacttgcctcgactcgagtaacaccaaacgtcagatgaaaacgacgcgcacacataggaaaattcccccgcaaaattccagaggaccccccgcaaacacacacacacacacacacacacacaagcgctctttggtgacgtcaacattgcagcggcgctgtgtttgttatttatttttgtcattaaagcgcttcattgtttatatatcgtgtttaaatgtcaccccgcacagacacaaagaagtgggaaaaaatagaaggaggccaggatatatgcaccatacacacgcgcacacacacacacacacactccatacacgcacacaccagcacaagcgaaggaccaagagggatctccaacattctcggaataatttcattataccctactctcttaggaatttttttgcgccggccttcggagaggcaactgaaagttgatagctttgatgctttgtaagtttcaagaaattaggctgcagcaaaaaatgaaagcctttcacgggagatgcaaatacttaatgcctcgccttagcaatagatccaaaaaaaaaactacggcattgatgtacatgaacctctttgtatcgccttatgccaaacatttgcataacagaagggattaggcaacactttgttaaaggaaaacatgagatctttcaaaggtagtagtgcatggcagcccacaaatggtttggtttcaatcattgctattgtaagcactcttctttaatcatcagttgaggccagtaatatcttgattaaccaatatagcagatgacctattagtatttaatattgaaatactttattttatacgtgggtgaatttgaaatataagaatataaaacttgataaagatgtgaactaattatatcacaataaacacgaaaaagggcgctgtttaatggcagttattccgtcatttttaaatcaccccctgtaattaatagtttatcatcaatttttctgatgtctgtttttgcattggttgatatcgcttcgatatcttaattcatttcaaaagcataagctaattgacaaatcaattaatgtgctgaaaattctaaacttttatctaaagtttgagtcggcgtggcaagcaacacgtttttcaaaagtttgggcgtggcagttttgcgcggtttatggcggtacagtggtcctggatctgtatgctgaatctcaaaccttctagcttttatagtccctgagaactcgatgttcacacggacagacggacatttggacagatactgatcgtctattgaacctgatcaacaatatatacactttatatagtcggaaacgcttccttctgcctgttatatacttttcaccgaatctcgtatacccttttatcaaaggcactagaatattcaacgtctaggtttttcaacaatacaatgctcctattcataattctcga
PCR verification status
Line verified as correct.