| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT65331 | chrX 21384630–21386736 (2106 bp) | Cyp6t1, Ir20a |
      active |
procephalic ectoderm AISN, procephalic ectoderm anlage, brain anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 2 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 9-10 | brain anlage subset | 2 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | brain broad | 1 |
| 13-14 | ventral nerve cord broad | 1 |
| 13-14 | brain subset | 2 |
| 15-16 | ventral nerve cord subset | 1 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0031182 | Cyp6t1 | 3831bp upstream | BDGP FlyBase |
| FBgn0031181 | Ir20a | 34659bp downstream | BDGP FlyBase |
| FBgn0259245 | CG42343 | 55866bp downstream | BDGP FlyBase |
| FBgn0265922 | CR44711 | 70199bp upstream | BDGP FlyBase |
| FBgn0031178 | CG10918 | 84348bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tactggtgtgcgtggcattttgtgtgaaggtgtgtgtgtgtgtgtgtgtgagtgcagcgtttggtgtggtgtggtgtgagacttttgtgtggttgttgtggcctaaaatagcactttgttcgtccatcgaaaggttacgcagagaggaaatataatatataatataatggaaataatgtggtatctattcaattatatcgaagccgttgctttgccttcaggatcttcgctttcggaggtcaggtgctcccgattccgataccgatccctccgaaaaagcgacgagcccaaaaacctcgcaccagtgcgccctaatggatgacaaaagcacttttatggacattttatgttagtgcatattatttattatattaaaaatccattagtgatttttgaaacttgtggtcgccggcagccacatctttcattttcacattgattcgcgttttcggtttcactacggtttggttgggtttggtttggtttggcccggcattcagttttcattttccatttacattttggccctggccgagaccaaagtgacgtcaataaaatcgtctgtcgccatattgtggccactaattgcattttggttaagcctgggatggagatgtggcttggattctgtgcgggatgcgagtttggtgctggcttggggtctggtcttgggtctggttctggttctggttctggttctggttctggatgtagttccgttttgcatcttacagaatgctgatagcatgctgcacttgatttaagccacccagacacgcctactcgccccacattcaagctgaaagaagggggggagtggctggatgacaacgacaaagtcgcgccattaatgcataaagtggctgagataagtgcgaaagctgggggcgtggtcgcagcttttaatggtacctccccccggaacagccattccttgagatccatctaacggttgcaaggattaaagttgcttgcataattccacgcgcataatgaagctgcaactgcaaagacacaaagatggcgcccaacaaaaagataaggccaagaagtgtcgttaagcgttaaggaaagccgctctgggaagagtcaccgaaccaattaaagcacggctaatttcaatttgtaatatgtattttactattaaacatttaaagagagctcagattttttagttggatatagaccctcaacgccctttaaaactgtagtccctgtttgaataatacgctggattattcctcacatttgccagatcatccgatgcaaatactggcctgcccttcgtctcctttgtcctttcacaatggaaaagagggcatttcaaatccaatttacttagtcatcccactcaaaggaggtcggaaaaggaggaaacggctgggtcagttcaatggctatttgtattccgttccggttgggtcggtgtctctgtatcggtctcagtgcattaagcagtttatcacgttaaaaagattgaatagatgccctgcgattcgggcacaaaggataacattactgggacaatacagcccgacgcgtttccttagcccacttggtttttggttggcggtgcgggatctggaatccaatgtcacgacaacagtaatagatatacggtaaaagttggggagtaaaagtactccctgaatcatcttatcttcctatcttttccttatcctgaaaaatcagtttttagacaaacccaagatcattttgctaaaatggccaaaaaaaaaaactgtatttgcgatacctcaatggtagtatgaataagtatttcatcatagaaagaccttcaaagtggatgtaccaaaataaaacttaccatcttcctcaaaattaaaaaaaaaaaatcaataaccagataaagtacgtagtggcaattgtggaataatctagttcaaaagtgccccagatgtcccacaagaagttagaaaccagccaagtgccattgcattattgggttcgcaagttaatttattttcggtaagcaaactggcgagtaaagagccatttccccgagcaataacaaatatttcaaagcacccccagccagaggatacgtactcgtactcatatctatttctcccacatgggctcgcag
PCR verification status
Line verified as correct.