Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT7168 chr2L 14053940–14056043 (2103 bp) nAChRalpha5, NimC4 activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14brain broad1
13-14ventral nerve cord broad1
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0028875nAChRalpha5overlapping BDGP FlyBase
FBgn0260011NimC45078bp downstream BDGP FlyBase
FBgn0028872CG1809522402bp downstream BDGP FlyBase
FBgn0028519CG450024573bp downstream BDGP FlyBase
FBgn0266143CR4484933616bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agtgctgtggcagacagtcaacaaattgcgagtgtaattgccccaaattgatgttggccaggatgtcgttcgtgcattttaccagcctgacattattgcaatgcagcagtaataacatgcaatatagtcgagttatctttgaaatgctatgctgatgcattttgccgctcatcgtgcgccagagcaatgaaaatcaaaattaaattgcgtgcagtttcgctgggatagctcttttcttcaacgtcgccaccacgcttttccccaggctttttccatttttctgctggcacgaggctaacattaaaatttctatgcgtgccccaaagacggcaacacaacattcggggaggctggcgaaataagcaggaacttccagcagcatccagggctaaaattttagcaaaaacgagctttcacccacccacgctaggcacgcactttctccacacacacacacacacacacacgcagaggcagagaaagagagcgcgagtgcagaagagagagagagctgctctctttggggagaaagcagtggttgggggcttttcttttttcgtcggtaggtgctaggtaaggggaggtgagggtgttggggaatggagcagcaacgcttaatttgattttgaaaccgaagcaccctgtatacgctctttaagtgtttgtttatgcgtggccaagtaggacaagtaggaaaattgacgatagggagtgccgaagggaaatggcaagtgggaaatgggaaatgggcaaggaagttccagccagcgcatctgcctaataaaattcatttcaaaaagccaaggctgctgcttttccccttgcctggctctgttgcgttgttgtgacattaatttttacttaatttatttttgcgccgtcgcaaaagcattcctcctcacagcccccttcccccaaatcatcatcatcatgggcatttcaatggttttcggttttcgcttttgcgttcgtttttcgttaccaacaaacctctgtgtgtccaccaacacacacacacagaccaacagtttatatagatttacgtgtatatatatttgtttagcaggacccccaaaacaccgttcccatgccccccaaccatcttccagctcatttgccgcttcgacgacaaaaatttcagttttcagtacgttaatgtgcagtgggataggatgtgatgcggtgtggggagagggggggaggggggttgtgggtgttgcgagggtttccgtttggacagagggtgtgtgtgagctttaagtgccactgagattgtgttggtgagcgggtgtcagctcattggaaatatgggtcaagttgttgccgtctgcgctaaaaattaagttggcatgccagctgcagtcgacgtcgacgtcggcgtcatccggttggcaataattgccacagcacatttagggttaatcctatagggttaatccagcaacaatatatacagacacacacacatacaagggcatgattttggccccctttgttcgccacgttaatcgcccccaaaatgattcttatttattgttgcagttatatcgaatttatatggctccacaactggaatactgttaaatatgggtgtatttatcagtgggggagctaagggatttcaaggggagtagtttttctttaaaggcactgcggtatatatattaatacccagcggacaattaaactattatgcatgtttcactgtttgtttataattcgtttgcttatttgtataattgattcattattgcattatcgcctgaaatgaaacggaactgaagcttgcgaaaattgcattagactttattggcgttaatgagttaatatgttaaatgatatgcatttccattcaaacgtgatatctaggtttaattatttgtttttattattttgaaatttcgtgtatactcaactcattttgtttattattgatgcaggggaaatataggattaccgtaaatccttaaatgagcttttttagtccaaatatttcgcactaagcacaaataatgctgctaagagaatgttattgtgttcgggctttcgaattgactattaaggattgtattagccatattttatgtgatttcggttacggcca

PCR verification status

Line verified as correct.

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