Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT7178 chr2L 14072803–14074917 (2114 bp) nAChRalpha5, NimC4 activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14not active0
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0028875nAChRalpha5overlapping BDGP FlyBase
FBgn0260011NimC423941bp downstream BDGP FlyBase
FBgn0028904CG1687931680bp upstream BDGP FlyBase
FBgn0028526CG1529335254bp upstream BDGP FlyBase
FBgn0051769CG3176936794bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ccaaggatcgctcttgttaccccaaataaaataaaagagcactgttaaaatcagttccaattatttttccagcggaagaaatgaatattgaagtgttttttaattaaatgcgccgagtgaaaggcatctccatgccgaaatgcattgaatggtgggtgggtatttaagtaaatatgcagaaccataaaccacttaacgattttaaaatgcaacattcaatggaagacatgaaacaggttttttaattaaattaaagaagtaacatcttcgcgatcttaaggcactcgatttttattgagagccctatgaattcaaaaagagtaatgcatagtttgcaggaattccaccaatgccgaaaaatcgtatcctttcttaagtaagtcaaattggaaacaaggctgcgagtaagccaataagcatgctttcgccgttcagcacaatcagccagcatgacaaatggagaggggattattgagaactatgctcggcaaaagacaaatgaaaaaagaaagtgaaaaacaggccagggcaaaacaggatacaaaaagaagttgactttcagggcaaggcaagccaagccagagcaggcagaacaaggaggtgaaattaagggctggcgaaaggcggtgaaagtacaaataaaacaactcccaggcgcattaattaaaaaggagcagacaaagcgaggcgcagattaattggcatcagtgggagaaagacagtggcggtaaaaaggggcctagataagggccaagacgcagaccaaggatatggtggcgtgtcgggggcgtggcgggcaggggcggaacggaggaagtgattaagtagacgcaggacgacgaaaggagtggggtgcatatcaacggatatcagcggaaaatgagtaatgaagtcgagatgggccagccattttttatgcatacaggacacaatgagaaactaggcttgcgcttgtatgtgtgcgcatgcatggtggtgtgcgtggagagcgagcgacgcgttttatgctacactttcagtcggcttcgagttggcttactgtttttttttttttttttaaattccccgaacgttgttggcctgccatgtcaatgaaccgcctctgcgtgtgtgtgagtgctttgcgagaatatgtatttgcggcgcgcatatgcaaatttccgcataccaaaacttgtctttggcccggccgaaggctgtgcaaaaaatagagtggagggggaaataaaaactctgggctgtaataattttgccgtttgcttttttgctcatttaaaattcaacaactgccgcccgtagccgccatttatttatatatttttcctcgcctcccttagtagacatacaaaagcccatacacattcatacatacacgcacactatttgaatgcgaataagcttcatttatacatgggcttttcttgtgaggctgctgcactaggaaccatacaaaaaactgcacagatgcttcaaaaacatgtcctttttcccttaaggatgcatcaaaagcaattgagagctccagccaaagatacacagtacagtgtagatttttaagctaactttgttaagtttatgagatatgttcaagaatcttggtttctttttaaatttacgctagtttcagtgctttaagccgtgtcataaataatttttgttcgtatcacggttctgacaagcaaaactctatttaagatatacatatatatgttttcagttttctcatttcagctcccgttttgtttgcgtttttaattatatttttcgcgctctcacgttttgcggttgttagttttataattgtgtgcaccgcttttactccaaatgaacatgcgcattcaaaatttaaattggatgggttgcaaataggagttgctccgacaactgcagttggaatatatatcccgaaaggcaatgtcctgtcaaaagcaggcagttcctactgaaattaagtaaatgaatgaatttaaataagagcaggtccacataagcctggaaataagagaacctagggatattccattacgtttacgtggccagctaaatgaattatcctagtggcgtcaaacgaaaatcgcactcaatgtgtaagccgtgaaaattatggagcgtcat

PCR verification status

Line verified as correct.

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