Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT7398 chr2L 14477908–14480013 (2105 bp) CR44731, noc activityactivityactivityactivityactivityactivity
active
head mesoderm AISN, trunk mesoderm AISN subset, head mesoderm anlage VDRC

Annotations

stageannotation termintensity
4-6hindgut AISN2
4-6head mesoderm AISN3
4-6trunk mesoderm AISN subset3
7-8head mesoderm anlage3
7-8trunk mesoderm anlage subset3
9-10brain anlage subset1
9-10ventral nerve cord anlage subset1
11-12brain primordium broad3
11-12ventral nerve cord primordium broad3
13-14brain broad3
13-14ventral nerve cord broad3
15-16brain broad2
15-16ventral nerve cord broad2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265944CR447318132bp upstream BDGP FlyBase
FBgn0005771noc12951bp upstream BDGP FlyBase
FBgn0028882tRNA:P:35Bd17970bp upstream BDGP FlyBase
FBgn0265943CR4473020571bp downstream BDGP FlyBase
FBgn0028844CG1528326987bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gccggggaaagacaatgacaagaaccgccagttcagcgctgcgatggcaaacaaaaggcaacaaatgagggaagcctacttatcaacggcatgggaaccgcgccgaagcccgtacctttgagcactcaagattcggtccttgaaaggggttgcaatctacctcctcgactgctgacacttgaaaaagtgtgcataacaaattcgataatgaactatgaaatttttgccagattgtaaccctttttggcattgtcggaaatccctgccccacatgtcacagttgaaatttattttgctgtcataaattttgaaataacaattattgccatttatagccggcaaagggaatccttgaaatgggtttccatttgcataataaacgcttgtcccagaggaagacgtatttcatccttggcattgtcataatttcagggaaggacttagtttgagggatgacgtacgacggattgaggaaagctagttcttgcggttgggaaaatatgacattgtaataatattatttcataagtttgtgcttaaaagctgaatatatattcctccatcgatatacattcatggtaaataccattattttcattcattccttctattataacattttaaaagaagattgtgtacattacttcgacaaattcttgctgttttgcactgaaccagataaaataccattctatgtagaccgaaatttcgttctatatatttttaaaattacccagttttttgagaatgtttctcagatatttctctatatttttcattctttcacgtgtgttcgaagtgaagcatagaaagtaaatcaactgtaaaatggttcgttcctgctcgtaaagtataaatttgttccacaatctgcagaaaaatatgttggaaatatgcatatttcccccgttttctctgcactccaactactcgtaatttttatcccaaaaattgttcggctagtgagtgtgtgagaaaagtctcgagatgagaaatctgtgtttaggtacgccactactcactcggcttcctcacctcagccgttttccatttaaatgtaaattaatggtcagttaagctgtcagccatggagttttgggtctcattcagttcagttctgcggctctaacgatttgggtggttggttgatgggatgatgggaatgaccatcgcagcacatcacagatttgtggtgttaatttgctgtgaaatgttgactgaccagagaccagtgaccggtgaccggtgaccggtggaccagtttaccagttgatgccatttgcctgtaattaattgtctgtgtttaatgtgagttaattttatttatggccagctcgttatttacatttacgcagcgaatggagtccgatcttcacacggcacgcaattacagaacaatatttcagatttcattcacatttttctcttagctgtttcttttttagtcccagaagtcatcgttgttgtcaggaatcgttgtctgcccgagacgtggcaacactgacaggacacttctgacagccctgagacagcggggactaagcttctgctaatgtcaacagcaaacagttcaaattgtgcaaaatatagcaacgagtggtggaaatgggtatatcagatattgtaggaagaagtcgcatagctatacaactttcagggttgccaggctgactaaaattattatttatgacagctagtcgaaatatttatttttctaaaaacaattctgtaagcgaaataatttcatattaaattttgtacaaaagcggtaagagaattcaaaaattttggtttaattaaggaattaaggaaaaaataaaaaagtctgtctttctcaatttacaaaccttatgagcctgcattacatccagctattgtagggcatttcaagatataaaattgcattgccagtgaacaaagaggggcgaaggcggggaatacgaacaaaagggctggaaaacaaaagccaaacaataagcaacagtgacagtggcactgttgtcttctgctccacgttcccttctgaatctgacagttgtcaactgctgttggctgccgcctttttcgttactcggctgtcatcctccgaccctttgctgtttttga

PCR verification status

Line was not verified.

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