| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT7843 | chr2L 15325316–15327423 (2107 bp) | nht, esg |
      active |
trunk mesoderm anlage, trunk mesoderm primordium, head epidermis ventral subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 2 |
| 7-8 | not active | 0 |
| 9-10 | trunk mesoderm anlage | 3 |
| 11-12 | head subset | 2 |
| 11-12 | trunk mesoderm primordium | 3 |
| 13-14 | head epidermis ventral subset | 3 |
| 13-14 | head subset | 3 |
| 13-14 | dorsal epidermis subset | 3 |
| 13-14 | posterior spiracle | 2 |
| 15-16 | head epidermis ventral subset | 3 |
| 15-16 | head subset | 3 |
| 15-16 | dorsal epidermis subset | 3 |
| 15-16 | posterior spiracle | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0041103 | nht | 6416bp downstream | BDGP FlyBase |
| FBgn0001981 | esg | 8550bp upstream | BDGP FlyBase iFly |
| FBgn0028852 | CG15262 | 25950bp downstream | BDGP FlyBase |
| FBgn0264264 | CR43764 | 27618bp downstream | BDGP FlyBase |
| FBgn0011239 | ms(2)35Ci | 31181bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tgacaaatccgaagagatgaagccatgtcgatggcttgtggaacacacatgccagctgccctggcgaagatcaggatttggcaaggtgctctactcgtcttgattacatcatcaatggctaggtggtccagataaaataatctctaagcccttagagaaacgaacaaactgtcagcataaatctggcttatacatatgtagtttgtcataattttcagcggtgaaattttcgaccctcctaattgattgggaacggatgtggcagccattctcgattgctttatacctattattaattgccataaatcttggaacactaataagaagaagtctgggccacaaattcagtgctcaagctgcaaagtttccaaggcatttaacccgtcatttggtgcgactgacagtggtcataaactatgttaaactattttataaaaatgttagcaggtgtaaactcataaaagaaaagcattactaactgcagaaaaactttatgttactttgttaatgaaatttcatttcaaatgtgttactaaaatataatagtctgtttccttctggcccactgtagcagcgtctttgatttcacccgtaaactgtttcgatgctcgcctcgaattgctttcgtcaaattatataatgatgccaacagggaccggcctactacttcgaaatccggcgaccaggtcagcaggaaccacgcccactcacagccctcgaaatcaaccgacaatgcaccttttgcgtgggtgtggccgaagcaggccaaataaaagtcggtaatccttcgccgaccatcgaatccttttgtgcgaagcaacgggcccttttctctggccacttgacagtttaaccaaaaatgcaaaccgttgaaatcaagttaaatagtttctcgttaagcagggctgggccggtatgttgaaccctttcgaggcatttatgttggtgcctttttggcctcgccgcgtagcacctgccaaatgattaatcatcattttgacgctgccctcgactgaagtgcgttagtttgtattttccgctgcttaaatgctaaaagctcatcaattatcgccccgaaagcccaatgcatctgcctattttggggaacggtctgtccacagacttcagtcttcaactctttttgaggcgccaaaggtcgcactttcctctttcattttctcctctaatcatgtccatcaatttgatgggttgtaggtgaatatacaagttgtcttactcgctgcgcaatggaatgaagttttattttatagctcagcacgtgggaggtccacagatctcactctttggatatcgtaattgggttacagatgttggcctaagtaaggagaggtcttaaacgcgataaaagcgagtaaaatattggttggccgattgggctgctcaaatgtggccgcactttcttctcggatagacaactatttattacttgagcctacgaaaaatgtaaaatattatcaatatttttagtcataaattcgaataagttttatttcattcgaaatggtttaaagtacggctgcgctaacatgtctctttgaatttaaatatatatatttattaaattgagaaagtacctaacctttctcctcttccctgcgagttttcctatcgccttcgtagggcaatatcctggatttctgactgggaccaacgcaccgacatcggcacacttatccacagccaaagccaggaatccacttcaatcgcacgcgcagatgtttccccggaaaaccattcaggattcgatattcaggactcaggctgcaaggatttgttcattagtgcgaccactcgaggcacgctgcatttgaataaatagaagcaagtaaaatagaatggaaaaaggaaacatgacaggcgaaacgggagctggggatccccatgaaattcgggagttggggaagcgttgagtaattgaaaagaaagaagcgtgcgccggcctgtcggtatataaatcaccgtgccacaggataatgtatcccgagtgccccggagcactaatttgaattgcaccccggcatctgccaagtgcctggaagtacaatgtctgcggtggctggcttcgctcgaatgcaataggagatccc
PCR verification status
Line verified as correct.