Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT8888 chr2L 17379733–17381820 (2087 bp) Lrch, CLIP-190 activityactivityactivityactivityactivityactivity
active
lateral epidermis anlage subset, antenno-maxillary-labial complex, head epidermis ventral primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head subset2
9-10lateral epidermis anlage subset4
9-10ventral epidermis anlage subset3
11-12antenno-maxillary-labial complex4
11-12head epidermis ventral primordium subset4
11-12lateral epidermis primordium subset4
11-12tracheal system primordium broad4
13-14head epidermis ventral subset3
13-14head subset3
13-14lateral epidermis subset3
13-14ventral epidermis subset3
13-14ventral nerve cord subset3
15-16head subset3
15-16ventral midline3
15-16ventral nerve cord subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0032633Lrchoverlapping BDGP FlyBase
FBgn0020503CLIP-1904967bp upstream BDGP FlyBase
FBgn0051804CG3180415383bp downstream BDGP FlyBase
FBgn0265446CR4434618223bp downstream BDGP FlyBase
FBgn0265445CR4434524211bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

atttctgtgggaaggttgcctttgaaatgaagatagtgttttttgatcaatagtcagtaatacatttcctttgacatatcaatttcttgggtatttatttcagaaccgattttctgggaagtactttatcatgataccatcgctaagtccgatgattttttttatgttttcctttctgcattgtgcatgcaagccatgaaccgtgcagtttgacagccactgaagataagcgacgtgctgcggcggtcacatttcctcttttgtctgctgcagacggagaataaatagcaataaaagtacaaaaaaccagactagctgtctttttatgctccatcatatttacaatgcaaacaacaaatatacgcgtcggatacacacgacaaaagcatttcccctcgctctataagtttgctgttgttttgtttgccggtactttgacttccccaaacagaaaagatttcttgttctcggtcacttggcagacgttttgttcagtctggaaaaaagagtattgtgactaaaagaaaatgcaatccaagtgtatactaaaaaagcttatgaacccctgcttgctattaatgatatgaattattgttttgacgtaaaatatgaacctctcaatttcgtaacagttaccaggctgcaattacagttttgttattaaataaataaatattattaaaaattcaaactttgccagagcttaatattgtttatcggtatttttaaacaaatcgaagctaaatggacaagtaaggaaacgaaactgcttttttatagtatgacactgtggatccacttagtaacgatggacaccaggggattcctttttttgtgacaaattgatccaaaagattctaaacggcctttttatggctataaaatatccaagggagcgccactgttaaaccgctcagtaacgaaggacaccagacgatcattgctgctacatttccatacatatatatatatttattttgagtgagtttgttatattctgaaacagttttcgctaaactccctgtttatggctataaaaagtccaagtgggcagcacctttgtcagctgctgattcctaagccggcgccaactttgcggtctgcgcagctgctgttgctgctgcgagttgaagttgctgctgcatgttgctgccgctgctgctgctgttgctaccttcttgcatttgcttgggcttctcttctcacaatttctgctgaggccagctgcaattttgtacccgttttgcgctttttccttctcgatgcaattactttaaacaatttcctgctgttgatttttcgcttcactcgattgactctttcttgtgccgtcctttgtctaggtttttgtttatggttctgtttgatttgcgtgacacgcgtgttaattaaacgccccaaaggaatgcacaaaagtgtggctacctcccacccacaccgcaacaacaaatgattttaggaaatgctgacaggcgcctgcccattccccttaatttcatgccatttcgggggttgcaaatggcatgcgtgcaaataaagaaaaaagaaaaatggtcggtgtatacaccccccccccctcccacattttttctgtttcagtttctttgactttcttttgctttagaatcatcgatttcttggaaactcgaaacccttgtggttgcaagccattaaggctaagagccgttgccacctcttaaagtccaccgcccccacttgcgaaaacccttcgccgagggtggcttcattgttctcgaagaggcaatttgtagaggttcttcgctagggtgtatttacaaatattttccccaaagattaacccctaacgagaggttcagcgtatctcaatattccccctgttttctattttccacatgtccattcacaccaaaaatccagcattttaattagtaattagtcacgccttcgcagtcgatgactcaattgctggtgagaaaacgcatgaaacttattcgaaaatgaacgaaaaaccggaagctcgttggctctccatgtggggaagggttttccaaagaagaagggatcgtttccccatttcgaacaaatagcgcgtggccataagtcacg

PCR verification status

Line verified as correct.

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