| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT8889 | chr2L 17381424–17383547 (2123 bp) | Lrch, CLIP-190 |
      active |
procephalic ectoderm AISN, ventral ectoderm anlage, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 4-6 | ventral ectoderm AISN | 2 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | brain anlage subset | 2 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 3 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0032633 | Lrch | overlapping | BDGP FlyBase |
| FBgn0020503 | CLIP-190 | 3276bp upstream | BDGP FlyBase |
| FBgn0051804 | CG31804 | 17074bp downstream | BDGP FlyBase |
| FBgn0265446 | CR44346 | 19914bp downstream | BDGP FlyBase |
| FBgn0265445 | CR44345 | 25902bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
acctcttaaagtccaccgcccccacttgcgaaaacccttcgccgagggtggcttcattgttctcgaagaggcaatttgtagaggttcttcgctagggtgtatttacaaatattttccccaaagattaacccctaacgagaggttcagcgtatctcaatattccccctgttttctattttccacatgtccattcacaccaaaaatccagcattttaattagtaattagtcacgccttcgcagtcgatgactcaattgctggtgagaaaacgcatgaaacttattcgaaaatgaacgaaaaaccggaagctcgttggctctccatgtggggaagggttttccaaagaagaagggatcgtttccccatttcgaacaaatagcgcgtggccataagtcacggattgtcacagcttaattcgaaaatcaagtcacgtaggcggaaaacggggagcggagtggattggaaggaaattaaaaatatgtttcctaggttagggggagattaagttttatctctttaaacacttctagtatcctaaatttaattgaaaccttccgaaatttgttacgtactcttttcaatatcgaagtgcattgttcaattcagtttcattaattagtcaatttatgtttgctttataaaaatgtaattttaattgaattaatggtagacaaactgagaattttgtttatttttgttgctcttcaattccggtattatccatcatccaaggcactggctaagtggaatttttattgaattctttccctattcttttaccaaattagttttcaatttatgacacaatttatttttatctctcttccacggcaattaatcttcgcagtccaaaaataaaaagtttccttctattccagacatttccaccgaaaatacatcaaaatacagtgcgtcctctgaaaggtgacattccacgttcataataagtcttaaaattaataataacatctcatagttggaatttactttgtgtaagtaattaaaagaaataaactaaaataattttgtagtttataatctgtctcgtttcaatgaacataatcttcgatctgtgaagtattgttagatggaaaattgccatatctcgctttttcagcgattagaatgacaactaaccttatctacgtatcctttcgcctttcagagcgtttactgtatgtgtatacaacaaacacaagtgaaaatcgatgagagacatgtcccgttgtgagaacatctgttcgagggtagcagcagctgtgagagggggcggggtcctgcgagagggcggtgaattttctgggtgggtatttcccatttactatttctccgctggtgcatattttttggtcctaacaaaaacgaaagttggttgaacttcgacaaaattttcgtgccggctgcggcgaaaataaaaataaataaggataacacgaatagtgcaaagtggcgaagagcgaataacggcggtaattattgtccttgagcgcagtccgaaaagggagagaatgggagagccgcagagagaaagagcagctgatgggaggacagaaaaggaggaaaaggatgaacctccgacggctgctgcaaattattgattttcaagcaacaaaaggaaaattcgccactgcaatggagatggaaaaacttcgttagctcaccggcaacaaacctcctttgcttaaatgccgcaccctaaaggtatacacatacgccaaacattttcgataagcaactaatttaattgctttatcagtacttgtacatatgtaaactctacttttactttttctgacgtcaaaagaaaactttataactaacaattttctaatcaactttaataccatttaactttgtaatataaaaatgtatgctttttccaataaaatgttattaacttcgtacattaagtattattaagaacagtttaaactttacttaggaagtaatgaaaacccaattttttccggagctacgaaaccggcttgaagaacaccttttctttgttctcccttacgaatatacactatacaatagcggtacgcacctgcgatgacagtgtcggtaagtgagtacttcgttccagtcctgggaaagtccttcagcttgcgattggtcaggatca
PCR verification status
Line verified as correct.