| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT9081 | chr2L 17748587–17750842 (2255 bp) | CadN, CadN2 |
      active |
head mesoderm anlage, trunk mesoderm anlage broad, mesoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | mesoderm AISN | 4 |
| 7-8 | head mesoderm anlage | 5 |
| 7-8 | trunk mesoderm anlage broad | 5 |
| 9-10 | head mesoderm anlage | 2 |
| 9-10 | trunk mesoderm anlage | 3 |
| 11-12 | not active | 0 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0015609 | CadN | overlapping | BDGP FlyBase iFly |
| FBgn0262018 | CadN2 | 38384bp upstream | BDGP FlyBase |
| FBgn0262876 | CG43231 | 42446bp downstream | BDGP FlyBase |
| FBgn0263338 | CR43419 | 43825bp upstream | BDGP FlyBase |
| FBgn0262017 | CG42830 | 63366bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gagcaacaagagccagaagggaaaccggggttgctactcttttatgcgaagccttcgcttgcatttaaacaaattttccctcggtcggaagttgtttgcattttttttttaatgtggcctgaaaattccattagaaatgacatattctgcccatattccactcaaacgaagacagtaaggctcaattgaagaagaggcccaggcacacagaatgctgcacatttggcgagggcaaagggaatatttccaagtggcaaccggactgcccaagttttgacccttcctccgcctctcagtcatcgtcatcatcataagtctcacacatgctgctcacatgttctggacgagacgaatgcattaagcagaaatttcattcataaagatttcatttcatttcgttttcaccccgactcaaagagaccacaaggcgttggcctggaccagcaaaaataagtgcaagaagagcccaaaccgtaggagatttattgcacaggggcgtaggtagcgcctttcgagagggtcataaaaaccagatggaattggtcagggttaacacaagtatttacttatattaaatttattaactaatacctatggtttctcaagtttatttagtaactatgcagggtaatacgtattaaaacgaaatgggaagaatgcataggtaacttgaaacgggtaacggaagaattcaaactcagttacctcataaaggcaaaagctacaccaaagtctgaccatccatccccttaactgagcccctgtgcggagcatctcaaaggagacagcctcaaattaaaattcgagcagcgtcaacaaaaatataataaatgggaaattgtttaaatatttgccacacacgaatgcgaggcatgcaaattcattgagcgcttgaaattctcaatttagcaattcgctttgctgcaactcaaagaatgcaaacatggggcatcaaggaaattattattgttgtgtaccttgaattttgcagaggacgtgctttacgaacgcaaaaaaattaattgaaaatgttccacgcaaaggaagttgccaatcttggaacttgctttgtttatgctcttttttgttactttgcataagctgaagtcgttgttttgctttcaatttgaccgcaaagcaatctcaatcaatctcaatagttattgaccagccaggcggcccccccgtcgaatatcccatatccacctacctaagactccaatatttcacgtgctcttttcgcttctcgcgccgccgtcgccatcgatcaatgaatcttcgacggcggcgcgttccgaccgcaataagtcaaatacgaggccagcgagcttcattatgttcaaaagcccaaccgcagaagggagccaacctcttcgggccaatatagccacagccactacaaaagacatagcatcgcagcaacaaaatacgactcgtctcgggcccaaaaggcaagaacaatgcagcgcagataagtcaattatattgacttggccaagaactcaactcttcggggctgcctgtctggggcttttaaggtggcaagcagctttttgctgctcctctcacaattcccacagtcgaaagtcaacgtcgccgtctcagcgtcttcagatacttttttactttttgcctttggcctgaaccaaggcgataacatcaacgccgtcaatggcaaagtggcaagcagtgggctaaaatcgttcgaatgcgcttttgtatattttcaatatatatatatatttatatattttttctgagaagtaacataaaaatgtaaaagcagaatatatttagtaaaagcacaccaataacttttttataaataaataaatatttaaacttttagtccacggttcgataattccgttgaaccgcctttgccacactttgctcacaaaatatcttttgaccagacggtgttttattattatcccgaccggcacgtagatttatactcatatttattttttttgctgttatttaatttttcctgaattgtgtagcatcttcgaccgctttcagtttttggtcttgggtctttccgttggaacgtcaagagtgtagacgccatttactgattacattattgctcgcaaattgctagattatagtttgcttgttgctgcaaattattgctgctattattgactgacaaattatagttattagtttttcatctttttcaataaaatggaaatactcaagtgtgggcaattttgcacttaatatgtgagaaaggttcgctgaagggag
PCR verification status
Line verified as correct.