| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT9084 | chr2L 17753976–17756084 (2108 bp) | CadN, CadN2 |
      active |
trunk mesoderm AISN broad, trunk mesoderm anlage broad, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | trunk mesoderm AISN broad | 4 |
| 7-8 | trunk mesoderm anlage broad | 4 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | head subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 1 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0015609 | CadN | overlapping | BDGP FlyBase iFly |
| FBgn0262018 | CadN2 | 32995bp upstream | BDGP FlyBase |
| FBgn0263338 | CR43419 | 38436bp upstream | BDGP FlyBase |
| FBgn0262876 | CG43231 | 47835bp downstream | BDGP FlyBase |
| FBgn0262017 | CG42830 | 57977bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
agaaagaggaaggaagcacgcaaaatgcgcgccatatgatcgtgggggaaagggggaagccctgagagccgcgaaatgggaacacgtcaagtgggaaatgcgggaaaaacgaagaagtgcccccgaaaatgtccttttcggtcttggagagtctgcgttgtttacaactcacgcacacagcgacagtctaacacacacacacaaatgcaaggcagagtgacctcacgttaccgttacgcgcttccaatcggaattacatttcacacaaaagccggagctacaatttcaaaacacaccgaacgcgaagccagcaaacggaattctgagtggaacctttgagatattttatccaaggagcggtcgcggaacgcagcggaaacggaacacagcccctaccaaaacgagagagaaggtgcgagagagcgagacagagaaggggtgaacaatttcgcagacatttggcaattgcatttcttggactggagaggctagaatggggataacgaaaccccggattaggtggtccccacgaatttctgtaattaagcagccagtaatgcgtaaaacgggttggggtgaaaagtgtggaaaatgggcgggaaaactgggcgaacagggccaaaaaggcagcacaagcaaaaaggggttgggccagttttaatttcaaattcaaaaagaaggccaattaattaggcaggagggtcggatttaaagcgactgctggaaaagcccgaaaagatggcgagatgatgacggtgatggtgattctgttgacgatgcctttgacaggtggcccgggtgggtggaaaatgggcttaagtctcagtggctggataccttacacgaaatgtgcgttaaaagttttgatccaagtgcgggaaaagcttggtttcgacggaatcccaaacaactgtttgggttttccaaaagggggaatgccaggaaaaaggcagtttgaccgtgttttatttcaaagaattttattcaatcactttttgcttttataggagtaagaaatgtattgacatgaaagaatcctattttataactacctattcctctagttctttcagcaatctgtcttgaagttacttaacttttcatgttttttactagagtttaaggggccaaaaatactttcaatggattagcaattctttctggtcataaatccccgtctagacactttttgatttttttccaagccaaaaaactttgccagccctctctctaaacaatacatttatccattgcggacccagcgtggtacccatcaacttttaattttgtttcattttttcgcaatttctttttattttctgtattcatatttagaggcgctatgcattcgctgaatattttcaacaaatttcatattcatagcgcgttgagttgtttttatcggagggatggcaaacaacgcaaacaacaaatctaaccgaaaatgtttacattgacgggggcttcataccaacaaaactgttggatttttcgccactcttgctgcgttccttgggcataatttcactcattaaaattccataaatcgaggcgaaaagcggcaacatcgtataattgcttttcactcctgattgcatcgcgtgctcgataagaattgattggattgcatcggattgaaagcgagccgcatctcaccttgcgccaattaaaaggttctcaagttgtctcgtgtctctggtgttccgagggatatcatccccagctctctacatcctctggattgccggtcccaacatttggccacacattgccggcacatgtttgctttatgagttattcccctggaaatttttgaaaaacaaagatgagcatatgggcagcaaaagtgagacgccctcgccctcataaaaggttgaatttcggttggatcagttgacctctcgacgggaatgggaacggggattgtaaaatgacaaaggccacgcatgcgcacacgctctggctttttttttttaatttttattattttgactctatcagaaagtgcttaatcccgctcatccatatgagaaacatgtccgggtgtgtaatgatgatgacattattggctgtgccgcgaccagcatctttttgtgcggttgcggctat
PCR verification status
Line verified as correct.