| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT9666 | chr2L 18874232–18876337 (2105 bp) | tup, mir-4946 |
      active |
amnioserosa AISN, dorsal ectoderm AISN broad, dorsal ectoderm anlage broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | amnioserosa AISN | 4 |
| 4-6 | dorsal ectoderm AISN broad | 4 |
| 7-8 | dorsal ectoderm anlage broad | 3 |
| 7-8 | amnioserosa anlage | 3 |
| 9-10 | dorsal epidermis anlage subset | 2 |
| 11-12 | dorsal epidermis primordium subset | 2 |
| 11-12 | cardiac mesoderm primordium | 2 |
| 13-14 | telson subset | 3 |
| 13-14 | trunk epidermis subset | 1 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003896 | tup | overlapping | BDGP FlyBase iFly |
| FBgn0263568 | mir-4946 | 7072bp downstream | BDGP FlyBase |
| FBgn0032721 | CG10602 | 14985bp downstream | BDGP FlyBase |
| FBgn0032720 | mRpL13 | 14985bp downstream | BDGP FlyBase |
| FBgn0032719 | CG17321 | 19123bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
aggctgtggatgtggcggcttggggggattccgagtccgattcggatacgagtacgattctggatgtgaatctgaatccgattccgattcctgccgatctggctgcgttccaataaattgctctgttttatggcaatttaagtaggctgctttatggccctccaacccgtcgctcttccctctcacattccccgactatcccgcctagttgcgaatcgggttcggattctcgcttctcggatctcagatctcgatctccatctccatcttcacctccatcgggtaaaccgcatgattcacttgctgatctgtgtggtcggccggggaagatgtattacgtggtctacccacttttaggcggcgacaaaacgctcgccgccaacttcctcataaattaaagaaaaatacaaattcgaaaaaaggcgggcagtcgctggaagatctgcaaactcctcaacttgtttggtcggttttcagctcgccttgtaggcaacaattcaatttgacataatgagctacattttgtttacaacggcaaacgcatggctgccagttgtttctctttgtagtgggaggaattaagatatgaatttcataggtccatgtacaatggcttgaaggttagctatgctgattcgaagacgaatcacttaactgtcattggatcttagtaatccctggaaagcgaattcgtctaaagaaaatgtatcttattcaactttagtggttttaggcagctagaatgcttcccactcgcgaaacaacttttggtgtgatccaatttggggagcattatgacttcctatgattcgtggcagaccgagaaatcaacggtgttttggacataaaccagaggcagcaacttgtttggcctgtttcccagccacatcccctcctctgcccgcaggtgaatgcctctctttccgtctggccgtgtggcaacatttcaatttgacataatgagccgcaagcccgggttgcaggtagagatgtttgagctggcttagtggttgcgaccattaccatccgtcgggatatgctatcccgtcaaaatattgtcaggtaactaacggcaattgcggctaccgactggcgacgtgtctgcccaaagtcgcgatccctaatatccatatgtatatatggtatatatatataataaccgaaccgaacgagtcgctgaatgagtcgccccgtggcgcgacaatcgaaattggtctcgcctttcgagaccggggttttgggttcagttcatcagtctggtcctcggcgggcggtccaacctgttgaacactccacttgacattgagtggagtggttctaagcgggccaacaagatggatctggtgcacccctgagtgtaatgggatatggccactgttgcacttcaattcgatctcgattttttggtcggattgtgcaatctgctcaagtggcgtctggcctgtgtgattggattctccctcttggattccagctgacgccagcggcaagtatttgaagtcctcatcctcactttatggatctcgcataaaagtttgtttttctaggcagcccgtggttgtatctgtttttttaggggtcctacctaggctcttttattgtctttcatgcttaattagtcattaaaacaagggttataaaagtgacactcataaagccagcgactagagtgggtatgggccagaataaagctttaaaaacgacgccattaaagtggccaccgcatggcatgcaacacgccaaaatgccacacgggagcttgggtatatcccggttgcacctgaacggggcatacatatatgtgggcttgcatgtgtactggtattacgtatgtatgtatgtatttggccaggtgtcatatggcgctgcgggtgctccatcgaaaatcccagcgggaaatgcaaaacgctcgccactcttaatgagcgcctggagagaggcacgagtttcccccattttccctttcgcctttccctcgatttcccgcgccctggagctctggggctcctcctgttttccaagtcctcacgcgataaacgggcgtggccgtcagttgttcccttattttgtggcctggttaactcccgactaatttctggcctgcac
PCR verification status
Line verified as correct.