Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT0622 chr2L 1272936–1275026 (2090 bp) robo3, CG5397 activityactivityactivityactivityactivityactivity
active
brain primordium subset, head subset, lateral epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12brain primordium subset3
13-14head subset3
13-14lateral epidermis subset3
13-14ventral nerve cord subset2
13-14brain subset2
13-14peripheral nervous system3
13-14head epidermis lateral subset3
15-16head subset2
15-16ventral nerve cord subset2
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0041097robo3overlapping BDGP FlyBase
FBgn0031327CG539729919bp downstream BDGP FlyBase
FBgn0259229CG4232943135bp downstream BDGP FlyBase
FBgn0262944CR4326355152bp downstream BDGP FlyBase
FBgn0011294a556225bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tggccatccatttgcagattaaccgcgattttaaattcggcaattctaggccaaagttgctctttagctgcttaaaattccttttcgctggcgctaaagtttccaaataaagttttgaatggtaaggctggggaataacaaaagactatgctaatctctggcttatctaacctatgagcccagcccttttccaccttttccacccagttaatttcccagcgtttgcattatgcaaaacaaaacaaaaaggggtgaaatatgcagagaaaaaaactacttagctgctaagctgccgggtcttttgccgcatatgcaaatctaaacaaattaattccaaactgagtcctttgagcggaaattcctctgcccccaactttcagcccccatttgctgcagtttcagctgcgacttcatttgcaacgtcaacggcaatgcgcattaacattgttttcatttgccaacgagcgattttccctcctttttttttaattttttcgtttcgtttcttttcgcatttgtacaaaccgctgacgatgatgacgccgccgctgactgacgcagcggaaacggaagggggcctttcccatttgatacatacatatatattccacattcctttcatatccacctctgtctcctcttttttcaggatcccatccgccgcggatagtggagcatcccatagatacgacagtgccgcgacacgagccagccacgcttaattgcaaagccgagggcagccccacgcccaccatccagtggtacaaggatggggtgcccctgaagatcctgccgggctcccaccgcatcaccctgccagccggcggattgtttttcctcaaggtaagcgacgggcggagatgcgccggtggaaaattgaaaaggttaagtgcagccagggggtaaatggaaattgggatacctggatacctggatgtggaacgtgaatgattgtggtatttatggaaaagtatgcttgatactaagtccccctttttatacgaggcacaaacttattaattcaaaatgactgcttacatagatgatttcgttttatataatcaagagaataactacaattgatgtgctcaataaggaacttccttcggagtcagtgagaccatgttcctagccaaatggcctgtggtgtatttacattatttcgccagcttggattttcttcacttcagttcgtcctcttgttctatttgcatgcataattattatttcagttgagttccatgctttcattcataatgaaagagacaatggcgaggagtaaaggaagatcctgcgagttgcttaaaaaatattcattttgccaggccatctgttgagtgatgagcaaactaattgcttttatttttaactctcctttgtcggccaactttttccgttcgtatcatttggcggcaagctgcaaaaatatttttgcagaaaaattgttcggtcttcgctgggcaacaacttcattaacgcaaggtaaacaaacattaagcggggaaagtcggaaaagcgggaaagcggagaaaggcagcggcgcaagagaaagcgacagacagacaaataaagacgtaacggaagccggtggaagcggagccagcaaaagtcagttgcagcctgatgagctctgattgggaggaactgggatggctgaacactgagagaaatgaatgcgtactcaaaattctgatatttctcgatttaaatcgtagtattttgttcataactttcttagaaaacttctgaagatagaatgtcatacctcgttgaactcgtaataaaatttgcatttacgcctaaaaattttattttttagccatttttcgcaaaaaatcatgatgttacccctttccaaaattcgaaaattttgaaaaaaatttttttttccgaaacgttcaaaaagtgattctattggttagattaggtcaacagaagttcaaaacagtcgcaaactcgactgtgtgactatttttacacatttggcaaaatatcgtatgtcgttttaaatgcaagatatttctctcagtgcagcaagtatgagtgactgctacgagtgactccctggccacggactcttcgctgagctga

PCR verification status

Line verified as correct.

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