Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT10276 chr2L 20077193–20079369 (2176 bp) neb, pr activityactivityactivityactivityactivityactivity
active
midgut chamber, amnioserosa, midgut broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14midgut broad2
15-16amnioserosa3
15-16midgut broad3
15-16midgut chamber4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004374neboverlapping BDGP FlyBase
FBgn0003141pr1736bp downstream BDGP FlyBase
FBgn0263773fok2077bp upstream BDGP FlyBase
FBgn0045064bwa3475bp downstream BDGP FlyBase
FBgn0032843CG107304999bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ctctcgccgattcccgcaaggcgatcgccaatggacccctgggctctgggacgcccagcaccttcgttccctatcgcgagagcgtgctcacctggctgttgcgggtaagtgttacgaaatagttcttagctgcgtttgtacttatcaaccgggtcagtaggttggtctactttcggctaatgataactctttcttatccccttggtttttgaaatcaataattgtacccagaagtgattgctaagtatgtgtttcgaataagttcagctcagtaaaaccttataacctcatgtcttcaatataaatgcatatgtatattcgcaatgctttccgcacttttgccaccaccgataggattgcttatcaacactttcgcttcgattaggcagtggcccacggaatggggtccccttgcaatcagtaattacccggaaagcaatcagtacgtagaactgcactgcaacatgcaaatgacacgttgacccctgcggaaagtacccacaaaatgttcgtacggtcaaatgtttacttaactggctggcagatattcgtcttttcaacagatctcgtgatgagctatgaagcccactgtctacagagatatcatctcgactcgcgcgacacgcgaattctgttttaatgatgtctgcactgcgaggagcagctgctagacagatttatgttggctctatcaattaactggggtgctaattactttaattaaaataaagcgtcaaattgtccgaaaaaaacaaggaaaagaagacgacaacatcagccagagattagattgagtttatctgcgctttataggactaaatatgagagatctcgagttctaaactcgaaccttgttatcattcgtttgtttattttgtttgctaagattgccagcagacttagtgtattttttattattattatttccttatcattttcgataggaaagccttttattaaggtctaccaaatcaaagacctcccgcacctcaatcaattgagtgattaaaattttggcctcttatcatatctatttaatctattgttgttgcttttcctatgtgaccataaaatttatgacctgatacaaaggcgcacgtgtaaactttctagaaatttattttaagaacgcgaataaaaagatagcagtgtcttcacccgggtaatataattattttgttataaaacctcagcaaatgcttacatagcattagcaggaaaattgttataaacttgtcatgagacttgaatgttgtgcattagttaacatattagctacttgtttcacgattgtttgaattgagtaacgactgcgttttctttagcaatcaatgtaacatacttatgtgtgcattttaagttaacaactgctcttaagcgaacgccacacgttcgtaataacttgattgttggaatattaccaggctagttaatccgaaagtgagggttttatataatacaagtatctggcttctaaaaaaaggcgcactcgacatttgcgacgtaatttataatcattcgactgcattcaatgagtaattacatggcgcccacaagtgagaggctcttgatcgaaagtccaaacacttgtcttttttcccgaaacccgttccactgagtgttatttagtgtccagtgtccactttgcttttcgttacggtagtacggcccataaaatggctcacatgatttatttccgtacgcggcctttgccataaaaggtgaagacaaatatttcttggaatggcgtcgtaggtccgtaggggactctcgcagccagcgtagtgacgaaacgcaccagattgtggttgcccaatccatctttaaaatcattgaaagatttagatggtttagatttagggtttgtatgttgattgttactagttgttttcacccctttaaaaggaggggggttttgttgtgttttttttttatatatcagccgaccttgttttttgcctctgatatttttgggcttccatggttcctatctatccgtgaagtacttttcctatctttgcatacgacacaaaagttccatctacatcttcacttgccaccccatagatttaaaaatactttgcagataatgctttatttggtatttttgtgcggtacttcggcactaaaacattataacacttgatacgttatcgcgtctcctaagttgcgacacc

PCR verification status

Line verified as correct.

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