Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT27805 chr3L 8896706–8899135 (2429 bp) TrpA1, tRNA:CR32034 activityactivityactivityactivityactivityactivity
active
ventral nerve cord broad, brain broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14brain broad1
15-16brain broad2
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0035934TrpA1overlapping BDGP FlyBase iFly
FBgn0052034tRNA:CR32034185bp downstream BDGP FlyBase
FBgn0035935mfr2311bp upstream BDGP FlyBase
FBgn0035936Tsp66E8893bp upstream BDGP FlyBase
FBgn0020633Mcm79297bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ctgggcctccatgaggtcaggtggcgatagggcgccgcactgaccgctgtagactccgttgtagagcttgggcatcctggtgctcttggaactctggttgcgttccgtggccgtggccggagctgtaatcataaagggccgctggtcgcgactgtacgcgctggttagtgcctcgtttgtattttgcaacttatcaaacatcatcgggctgggcagcaatcagtggactaattagatattgattgggttaaacggtttgcaaacgcgtaaaccgacagcaaagcaatttagataaaccgtgtgtcacatgatatcgccagatataggagatacgagcgatacgacgattcacactagatacaactgtgtcggactagaactgaagcgtaactgcaactagggctaatttagcagtaacccttggccaatttacacgcactgagccgtatatatatactgtatgtataaaagtacagctggctagcaagtcaatggccatttgtcattctacacatttatagccactgccgcccgagggaatcgaagccgggactccctttcgcgggcccattaactggaactgtctaattaatggtttgtttattttcgccactcgactggagaaatttgcataatgccaagcctttgtaaatccagacttacttaacttccgccagccccattttcgaactgctttcgacgagcaaaggattcaaactgcaaggcttctcatagtgcgcagatatttctaggcgggtattgaacatttaattacattgaagagatacttatcagatgatttggacgatttccgtctaatgaaattagaggtactaagccttaggtgagaaaaaaagctctgattatttctacacccaattggatgagttgacaaaactagaggctttttgattagtctaagtggtgatggtgggcaaatatcagagcaaacattgacgggccatcgggtaaataaatcccttaattaaagggaaatttaaggggttactttgggtcatgagtacactatctacatggtcttgcaaaaatggtggatatattattcagattattgccttacctttgctatattccaactattcaaaccctagctcgtttttccactcagcgcgtttggtattttcttggagagcagctgacaggatgcacttacattttcaatcgactttgaatttaaaaaacttgaatttgattttgatttcggccaagactagaacggagcacacggggcaggcacaactgcgacagcagcaggaattttccgaatattttcgcactgagtttagcagcatttaaggctgcttgccatatgtttcactctcgatcctctactgcgacgtggaggaagcactataagaacgcgagcaaggactttggcctctgcctgcaaaggcaaagggatggtgcttaaggatatagctaaattgtgctcaaactttcacagctctgatggacactgatggatttaattatgaaacttaattagcaccttttgatgtacaatttgttcaaaggggtcgaatattcctgtgagtttcctgctgagtgatttgcgaaccgacagcctcgatagctggacaccaactgaacgtggcagcctttgggccctataggtttcccagccagaacggttcagaccagttcggggcggtcctgataagcaatgtcagcctttcgtcactctcgtctcgttttgccgcgactgccgccattagcacattaccactccggtataatcaaaccgatatattgtagataccatatgcacacatgaacatccacaaacaagcgaatcgccgcttttgtcacccacatggtgaaataccagagaacccctgggatagttctggatgctttaaaggcttctagctcaagaaataactggagatgggatgtttctatgccaaatcgtgtacaaggtagcatagggatgtattagtgtataatccatgttttaaaatggccaaagaacagctaccatttaaacattcctactaagaatattcatttaattttaatattaacaataatgcttttataactgcaacaaagatgcatatctacttcataggacattttaaatattgcttagccttaaatgtttatatgtatgcagtcctttgaactccttatataaaccgacgtcataaccattcagtggggttgagtcccagtcccagtcattatcgcattcaccccacttcggcactggagatggctattagccaatgaaattaattactttttaagtgacggagtagcagggcaaagaaacaacaagctaatttattgaaaaactttcaaaacgccaggtaaaattcaatttagcgaacaataaaaaacaacaacaataaaacaaacaggaaagaaagaaataaaaacagtagtcctcactcaagtggaatggtc

PCR verification status

Line verified as correct.

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