Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT36871 chr3R 1340702–1342813 (2111 bp) Nmdar1, Itp-r83A activityactivityactivityactivityactivityactivity
active
ventral nerve cord anlage subset, head epidermis ventral primordium subset, anterior ventral nerve cord broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral nerve cord anlage subset3
11-12head epidermis ventral primordium subset3
11-12ventral nerve cord primordium subset2
11-12anterior ventral nerve cord broad3
13-14head epidermis ventral subset3
13-14anterior ventral nerve cord subset3
15-16head epidermis ventral subset3
15-16anterior ventral nerve cord subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0010399Nmdar1overlapping BDGP FlyBase iFly
FBgn0010051Itp-r83A2137bp upstream BDGP FlyBase iFly
FBgn0264427CR438457319bp upstream BDGP FlyBase
FBgn0051547CG3154712279bp downstream BDGP FlyBase
FBgn0037336CG251924530bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ttcgaaacgcacctttcagatcctccattcaatggagttaatggcagttgatttgtttcctttgggtaatgaaaggttggcaatggacgcgcattttgggacctgacatgataaattcacccctacattaatgatgacaaacgatgacgccccgaaacaggcatctcattgatttggaccaggtccaatgggcgtgggcttctgcttgggatggcatcccacagcgacagagacgctcatgataaatgtggcataatatgggaaatgtgatggatggaaagcaaagataatcaaaatggcaagccaacaagtttgccggcaaaaagagtttcagctttaagtgacgaagtctcacactgaaaggtgcattgcactttaagtgccgaagtgctcttcgtcattaggattttatggacacctttttgtgcataacagcgataatttattgcacaagaatccagttttgtgatttccttcattgtacatgagtacagtgcgatgaaatcacttatttcatttgaatggttctttacatttgtacccagtttgtaatattatatatttttatttagaataagtgacaaataagtaccgataatactttaatgttgccaaatagtagacaatattgtaaatcacttagctcaactaaagaccatcaataattaaaaagataattatgattataaatcttagctttctaataaccaaacccctacaaactccttctatatatcattctgcaaacctggttcataacaacaaaacgcatttaaagtaatattgtataattatagttcaatttgcacatttaagcactctttcgctctaagagctccagttggttagctcatggatattggattctgctggcgcattaccgcttgtcatcatcccatttccgaatcatttccccttaaattatggaaatgaatcgaaccaggtcgggttaaacacagatacgagtatgtgagcagcttcaagcgatggaggaatggtcggaaatgagcaggtaattgcatttggccaccgacttacccgattctcgatgagcttgtcgcacacattgaagaccgtcttgatgggattcttgtccatgcggatggttttgtcgtagtaggtgaccttccgcggcacatactgctgatcgaagttgaggtgctgcggttggatgggaaagcgtgattatcgcattcggattagtggagcatccagttagtcaatgggcttgcctttattgtggtgctaaagtgctcctcgctgtcggaattgctcagtacgccgccaatgttgtacgtcgagggattatccgaggcagtgtgcctctgggcggcatcaattggcgccaccaggagaacaatggcgagcccaaacaatggccggcaaaaaacaaactcagccatagccatgatgcggaagtctatagtttctgggggaggataaacgaggtgttttgtgcaacgatttcaatggtttctcgagcaaacatccagcattttctgcaagtcgaaaaggggagatgccgcatattaatggcattttccatttcccattgcagcaatgagaatggtcaaagacaagatttcttaaagtttattttgctcatttttgaaaaagcagaactttgaattcgcggtgttttcttacatatgtggtaatgccagatcgcgaaaaaatgaataccaacgcaagatcgttagagtgaccatttcattgtgttaataggcattagaagcaaaatctaagtatgtgagtcgatgagtggaaagattttaatcctcggccaatctatcaacattgatctggaattttcaagcacagatgactaaaaaactatgaatatttgaataagattcaaatctctaccctgtgctgccatgctaactagtatttagagtatgttagtattttatccatgcgctcccatctaatttatcatatggttggttctgcggttttcaaacacttgcttatgtcattccttgtcaatagtaaatgcaattaacgtgttactgtcaataattctatatatgtgtgcataaaacagttaagatgtcaattacaccatttattaacggctaactagtatttttcgcgcggtcacactaatcg

PCR verification status

Line verified as correct.

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