Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT40556 chr3R 8370135–8372280 (2145 bp) Octbeta3R, mir-284 activityactivityactivityactivityactivityactivity
active
ventral epidermis primordium subset, ventral epidermis subset, lateral epidermis primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12lateral epidermis primordium subset1
11-12ventral epidermis primordium subset2
13-14ventral epidermis subset2
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0250910Octbeta3Roverlapping BDGP FlyBase
FBgn0262383mir-2847102bp upstream BDGP FlyBase
FBgn0038063Octbeta2R8076bp upstream BDGP FlyBase
FBgn0028374Hug15338bp downstream BDGP FlyBase iFly
FBgn0013279Hsp70Bc32953bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cacagaaaggggagttggtatcggagaaacactttttcgaattaagttctttttgctgctctgattgctttttgtggttactttgtttttcctcgattttgcactttgtatctgcttttggcttgtgcaattgatatttttttttattaaaattatcatcgattcgactgcaattggtgtgcgatatgaaatacaagacttgtggtcatctgccaaacgagtttgttacaccaaagttgcaacaaagtgcgaacaatttgcggttaataaaaaccattatcagcaatctcgcacagaacgttggtaattgaaaatcaaatacgaagtgtcagtgcaatgatttcttgttgtcgatacacagagtacacgaagtttccgatcgattgacaatattctttaattaaattttcaatcaaagcattcaaatctcttacaaatcgcatcattacgccagctatgaatttgattagcttatgcctaaatccagacaaacagacacgccaatcggaacaacaatggtatgctaaaatggctcaaggcattcattctattcatcatttatccaggcatttatcgggagacattcgagatgccttcgtaggccaagggaccacccactgatgagatattgcccgaataaatgaaggcatttacatttaaaacatttatgcgcaaatatttgccgaccttaagggccatattgtcttacattcggcatggggtaacgttctttgcacacaaaaaccgaaatagcaacagaatcagattcagaatccgaatccgaatctgaatctgaatctgaatcagagtcccagtgaactcgaaaccattcgaaagtttccagcaaataaaacatgcatacacgagcatacgcatgtatgaccaaacaatctgaaactcgactgtattagttgaattcaaactttttcgagcgtaacttgaaaagtttcaatttgtgcatgacaatcgccgtctgtcagtagtccttctcctctatccaactgtctatctgtcggcgctcgtacgtgtgggccgtatgtcattttagtgtccctgcgacactaagaaaaaaataatcctccaagcactttaatctttacaaaaaatattatttgtataataagtcttaactaaaaacatggtatatcgttcaataaaacacattcagtgtgctcagctatctcagttttccataaatattattactaaaaaaaagtcatccttgtttatttccactaaaatcctacacatatcagtttcgttggaatttccaaaacctacaaattgcttgtaatttctccgaatccactacaaccaactcaatgttatttcataaaatgttttcgccatctgcacaaagtttagaaagctgagtaaaaaactttcttcaattcagagaacgaactgtgttaccaagcaatcggcagagaactttggggggcttttgataaatttgattttaaaggtggcccggtccgattttcaattaaatgcaagtgcactcgtaggtgcaaaatcgcaagtgcagaaaatcgatagccagactcaggtggcgtgctagtcgccttggcaaaacccagaggctttgcgctagccagccagttcattcacgaatgcgaaaaaggccaaaaggctggtggccaaaggtgagacactaaggggtccaattcgaatgggaatggtttgggcgcagtgccgtcggctgagcgaatcaagtggcaaatgccaaatggcatcctgacctgacccagcggccgtagcaagaggagaaggcgaagcaagaggagcaggaacaggagcatcagcaatagaagccaactcagtggaggaactcgaccgtcggcaaatggcacactgtgcaccatgtgcactgtgatacgggaatggaaaactaacgagaggaaattgtgtttcagaaatgcaatgaaaaattattgccgagcagtgaagcggcacggatatttgtcgctagttgctacaaaaaatcataggaaagcgcatcaagtcgggtaaaaaggagctgtgcatgtgcacaatacctcactgaattatagcaataaatgtgtttcgtataaaatgtgaaagtaaatggtgcgaaacgaagtttaacttatgtctattctgcttgaaacaggtaacagcacca

PCR verification status

Line verified as correct.

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