Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT9853 chr2L 19232937–19235236 (2299 bp) CR44189, drl activityactivityactivityactivityactivityactivity
active
ventral epidermis primordium subset, head epidermis dorsal primordium subset, ventral epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral epidermis anlage subset3
9-10head epidermis dorsal anlage3
11-12ventral epidermis primordium subset4
11-12ventral nerve cord primordium subset3
11-12head epidermis dorsal primordium subset4
13-14ventral epidermis subset4
13-14head epidermis dorsal subset4
15-16ventral nerve cord subset2
15-16brain subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0265078CR4418914803bp downstream BDGP FlyBase
FBgn0015380drl24317bp downstream BDGP FlyBase iFly
FBgn0051797CG3179726495bp upstream BDGP FlyBase
FBgn0265080CR4419129533bp upstream BDGP FlyBase
FBgn0265079CR4419036177bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agatcggacacgaggtcgaagaagattaattggtgatacagaactctcagtagaagtccctttattttgattttttttttgaaaaacttcagtccagtacttactgtaatcaagttgaactgcatttcccactgtacgtgctgacagtttgcgaccgaaaagcagaagggaagcggaaggaagccacggggaacgtggctagaaaatacttatagatcattgattcctgataataaaactatcagcagtgacgtaccgcatctcgagtccgcagcaggcagacaggataggattcgatatcgggacagggcgtataaaaaacaataaaaactcaataaaagcaaaggctccgagcttttaaaccgtgccacacagcccaaggatacgaaggttgcgatggatggggacaccgccaaagagctaagcgcggagcaggccctttttattgaaggacctgcggagatacacagtaagaaataactttattttatttaaagagagtctggtaaagatttggtatctaatgagaaaggtatttgtacaaaaagttgatactatcgatgttgtacaagtatgtaagcaacctgcaattaaagctgtgaaacgaaaagcaaaccaatattttcatgcagtgtatggataaacactacgacgaagctggcaagatgacaatagatttgattttaccagagcggacggggaacctcggggacttttgctggctgctgcggcgatggcagtcaagacccaagacacacaaagcaaacaataaaaaacgagcgcaagaaatataacaaaaattgaaggcagccagcaaatagttcaacagacaaaggaaataaaacgaggaaaatctgtataaaaaaaaataggaaaggaagggcggcggagcagtcacaataagcgcacatttaaaagtgtcaaatatcctttttatgcgctttgccccagccactttctggccgcccaacaacagaacagtttatattccaacgagagttttgtattttactttatttcgttttacttttttttcccaccgctttgtcaagctgggcagaaaattgtatagaaatgttaatgcgatttgatttaaagaatagggcccagaatcaagatgtagctgaagacccttggccccgggaatacatttccatatttaagagcttctttatgacgtcatttcggtggcaggttctccacagtggctactacgctgcctacaaacaattaagcgttgggcactgcaggctccgtggatcccagtgccatcctgttcccattgtccggtggcagtgacattaatttaatccttgaatgcatctttgacagcatcatcagtgcgagcagaggggacatcagcctgaggaaggacccagtttcccactcaaagtacccgaatagccagctactgcgtgtggcattgtcaaaggaattagttctgtgtttttgatttgcggaaggaggcatgagactccagcagcggtctgttgattgcttaaataaatatgccaccaggcggctccgagcgagtccaacgtgcagcaaacaatgcctttgagaatgggtcttttgcattttacagagcattccacccggcagatggggaaatgtggagttgggtgggcgaaattcacccagtagaatgaagtgtaatttgagtttttgccactgacagtttttgggcactttattaaaatatttgactccgtcggtaatcattgtcggaaggcggtttctgtttgggattagactggggttacagcaccaacgtgaaatgggtatgacaatggaaatgcttggaccatgtttaatcgtcaacgaggagtttgacgagcagaagcccaggaaatgaagacgagacgttttaaattgcttggatgtcagttattctaccatatttgcaagtttgtgcaaacagtcctatcatagccagctaaatagaaatatagaatgaaaagaacgagattgcaaggcctgcaacgttttgattaaaatatcaattacatacttatgtggttcaccacgattgccaaatgaatgtatccatccattattcttgccatctagccattgccgtatctaaatcatgcccggcaacttatcaaccactcacctgagcgaaaactcgttttctagttgattgatcgactaactgaaatcttgcagcaagcaacaatcaatttcacaccaaaattgcacgctaatgagttgcaacaaccacaaattagttggcaggcgcagttttggggggctggggcggaggcatattgagccccaagatagccggcaacaagttt

PCR verification status

Line verified as correct.

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